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Foundation models excel at language, where sentences become tokens, and vision, where images become pixels, because both reduce to discrete symbols on a shared, fixed grid. Knowledge Graphs share the discreteness, but not the geometry.…

Artificial Intelligence · Computer Science 2026-05-08 Kossi Amouzouvi , Robert Wardenga , Jens Lehmann , Sahar Vahdati

Graph learning tasks often hinge on identifying key substructure patterns -- such as triadic closures in social networks or benzene rings in molecular graphs -- that underpin downstream performance. However, most existing graph neural…

Machine Learning · Computer Science 2025-05-27 Zehong Wang , Zheyuan Zhang , Tianyi Ma , Nitesh V Chawla , Chuxu Zhang , Yanfang Ye

Graph Neural Networks (GNNs) have shown remarkable success in graph classification tasks by capturing both structural and feature-based representations. However, real-world graphs often exhibit two critical forms of imbalance: class…

Machine Learning · Computer Science 2025-07-21 Shangyou Wang , Zezhong Ding , Xike Xie

Recent advancements in graph learning have revolutionized the way to understand and analyze data with complex structures. Notably, Graph Neural Networks (GNNs), i.e. neural network architectures designed for learning graph representations,…

Machine Learning · Computer Science 2024-07-09 Yu Huang , Min Zhou , Menglin Yang , Zhen Wang , Muhan Zhang , Jie Wang , Hong Xie , Hao Wang , Defu Lian , Enhong Chen

Graph anomaly detection (GAD) aims to identify abnormal nodes that differ from the majority of the nodes in a graph, which has been attracting significant attention in recent years. Existing generalist graph models have achieved remarkable…

Machine Learning · Computer Science 2025-06-03 Hezhe Qiao , Chaoxi Niu , Ling Chen , Guansong Pang

Using Large Language Models (LLMs) to process graph-structured data is an active research area, yet current state-of-the-art approaches typically rely on multi-step pipelines with Graph Neural Network (GNN) encoders that compress rich…

Machine Learning · Computer Science 2026-05-12 Dario Vajda

Pre-trained Foundation Models (PFMs) have ushered in a paradigm-shift in Artificial Intelligence, due to their ability to learn general-purpose representations that can be readily employed in a wide range of downstream tasks. While PFMs…

Databases · Computer Science 2024-11-13 Pasquale Balsebre , Weiming Huang , Gao Cong , Yi Li

Restricted Boltzmann Machines (RBMs) and models derived from them have been successfully used as basic building blocks in deep artificial neural networks for automatic features extraction, unsupervised weights initialization, but also as…

Neural and Evolutionary Computing · Computer Science 2016-07-20 Decebal Constantin Mocanu , Elena Mocanu , Phuong H. Nguyen , Madeleine Gibescu , Antonio Liotta

As large language models (LLMs) continue to revolutionize AI research, there is a growing interest in building large-scale brain foundation models to advance neuroscience. While most existing brain foundation models are pre-trained on…

Neurons and Cognition · Quantitative Biology 2026-02-11 Xinxu Wei , Kanhao Zhao , Yong Jiao , Lifang He , Yu Zhang

Hypergraph neural networks (HGNNs) effectively model complex high-order relationships in domains like protein interactions and social networks by connecting multiple vertices through hyperedges, enhancing modeling capabilities, and reducing…

Machine Learning · Computer Science 2025-12-08 Yue Gao , Yifan Feng , Shiquan Liu , Xiangmin Han , Shaoyi Du , Zongze Wu , Han Hu

Machine learning methods on graphs have proven useful in many applications due to their ability to handle generally structured data. The framework of Gaussian Markov Random Fields (GMRFs) provides a principled way to define Gaussian models…

Machine Learning · Statistics 2022-06-13 Joel Oskarsson , Per Sidén , Fredrik Lindsten

Graph neural networks (GNN) are powerful models for many graph-structured tasks. Existing models often assume that the complete structure of the graph is available during training. In practice, however, graph-structured data is usually…

Machine Learning · Computer Science 2022-03-29 Chen Wang , Yuheng Qiu , Dasong Gao , Sebastian Scherer

Next-token prediction is the fundamental principle for training large language models (LLMs), and reinforcement learning (RL) further enhances their reasoning performance. As an effective way to model language, image, video, and other…

Computer Vision and Pattern Recognition · Computer Science 2025-05-27 Zuyao Chen , Jinlin Wu , Zhen Lei , Marc Pollefeys , Chang Wen Chen

We propose Riemannian Flow Matching (RFM), a simple yet powerful framework for training continuous normalizing flows on manifolds. Existing methods for generative modeling on manifolds either require expensive simulation, are inherently…

Machine Learning · Computer Science 2024-02-27 Ricky T. Q. Chen , Yaron Lipman

Graph diffusion models have made significant progress in learning structured graph data and have demonstrated strong potential for predictive tasks. Existing approaches typically embed node, edge, and graph-level features into a unified…

Machine Learning · Computer Science 2025-12-12 Yisen Gao , Xingcheng Fu , Qingyun Sun , Jianxin Li , Xianxian Li

Graph anomaly detection (GAD), which aims to identify abnormal nodes that deviate from the majority, has become increasingly important in high-stakes Web domains. However, existing GAD methods follow a "one model per dataset" paradigm,…

Machine Learning · Computer Science 2026-01-27 Yunhui Liu , Tieke He , Yongchao Liu , Can Yi , Hong Jin , Chuntao Hong

Foundation models like ChatGPT and GPT-4 have revolutionized artificial intelligence, exhibiting remarkable abilities to generalize across a wide array of tasks and applications beyond their initial training objectives. However, graph…

Machine Learning · Computer Science 2025-01-22 Yufei He , Yuan Sui , Xiaoxin He , Bryan Hooi

Graph Neural Networks (GNNs) are widely adopted in Web-related applications, serving as a core technique for learning from graph-structured data, such as text-attributed graphs. Yet in real-world scenarios, such graphs exhibit deficiencies…

Machine Learning · Computer Science 2025-10-03 Zhaoyan Wang , Zheng Gao , Arogya Kharel , In-Young Ko

Graph Neural Networks (GNNs) are powerful tools for processing relational data but often struggle to generalize to unseen graphs, giving rise to the development of Graph Foundational Models (GFMs). However, current GFMs are challenged by…

Machine Learning · Computer Science 2026-05-25 Weishuo Ma , Yanbo Wang , Xiyuan Wang , Lei Zou , Muhan Zhang

Large language models (LLMs) have demonstrated remarkable in-context reasoning capabilities across a wide range of tasks, particularly with unstructured inputs such as language or images. However, LLMs struggle to handle structured data,…

Machine Learning · Computer Science 2025-02-20 Jintang Li , Ruofan Wu , Yuchang Zhu , Huizhe Zhang , Liang Chen , Zibin Zheng