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Sparse autoencoders (SAEs) are a promising approach to interpreting the internal representations of transformer language models. However, SAEs are usually trained separately on each transformer layer, making it difficult to use them to…

Machine Learning · Computer Science 2025-02-25 Tim Lawson , Lucy Farnik , Conor Houghton , Laurence Aitchison

This paper shows that masked autoencoders (MAE) are scalable self-supervised learners for computer vision. Our MAE approach is simple: we mask random patches of the input image and reconstruct the missing pixels. It is based on two core…

Computer Vision and Pattern Recognition · Computer Science 2021-12-21 Kaiming He , Xinlei Chen , Saining Xie , Yanghao Li , Piotr Dollár , Ross Girshick

Sparse autoencoders (SAEs) aim to disentangle model activations into monosemantic, human-interpretable features. In practice, learned features are often redundant and vary across training runs and sparsity levels, which makes…

Machine Learning · Computer Science 2026-01-01 Cristina P. Martin-Linares , Jonathan P. Ling

We introduce a novel masked graph autoencoder (MGAE) framework to perform effective learning on graph structure data. Taking insights from self-supervised learning, we randomly mask a large proportion of edges and try to reconstruct these…

Machine Learning · Computer Science 2022-01-10 Qiaoyu Tan , Ninghao Liu , Xiao Huang , Rui Chen , Soo-Hyun Choi , Xia Hu

Autoencoders have emerged as powerful models for visualization and dimensionality reduction based on the fundamental assumption that high-dimensional data is generated from a low-dimensional manifold. A critical challenge in autoencoder…

Machine Learning · Computer Science 2025-09-30 Qipeng Zhan , Zhuoping Zhou , Zexuan Wang , Li Shen

This paper explores Masked Autoencoders (MAE) with Gaussian Splatting. While reconstructive self-supervised learning frameworks such as MAE learns good semantic abstractions, it is not trained for explicit spatial awareness. Our approach,…

Computer Vision and Pattern Recognition · Computer Science 2025-01-07 Jathushan Rajasegaran , Xinlei Chen , Rulilong Li , Christoph Feichtenhofer , Jitendra Malik , Shiry Ginosar

Sparse autoencoders (SAEs) are widely used in mechanistic interpretability to project LLM activations onto sparse latent spaces. However, sparsity alone is an imperfect proxy for interpretability, and current training objectives often…

Machine Learning · Computer Science 2026-04-09 Vivek Narayanaswamy , Kowshik Thopalli , Bhavya Kailkhura , Wesam Sakla

Sparse autoencoders (SAEs) are one of the main methods to interpret the inner workings of deep neural networks (DNNs), decomposing activations into higher-dimensional features. However, they exhibit critical shortcomings where a large…

Machine Learning · Computer Science 2026-05-19 Michał Brzozowski , Neo Christopher Chung

Although sparse autoencoders (SAEs) are crucial for identifying interpretable features in neural networks, it is still challenging to distinguish between real computational patterns and erroneous correlations. We introduce Model-X knockoffs…

Machine Learning · Computer Science 2025-11-18 Tsogt-Ochir Enkhbayar

"Masked Autoencoders (MAE) Are Scalable Vision Learners" revolutionizes the self-supervised learning method in that it not only achieves the state-of-the-art for image pre-training, but is also a milestone that bridges the gap between…

Computer Vision and Pattern Recognition · Computer Science 2022-02-10 Shuhao Cao , Peng Xu , David A. Clifton

Instruction tuning data are often quantity-saturated due to the large volume of data collection and fast model iteration, leaving data selection important but underexplored. Existing quality-driven data selection methods, such as LIMA…

Computation and Language · Computer Science 2025-04-02 Xianjun Yang , Shaoliang Nie , Lijuan Liu , Suchin Gururangan , Ujjwal Karn , Rui Hou , Madian Khabsa , Yuning Mao

Traditional language models, adept at next-token prediction in text sequences, often struggle with transduction tasks between distinct symbolic systems, particularly when parallel data is scarce. Addressing this issue, we introduce…

Machine Learning · Computer Science 2024-02-19 Mohammad Hossein Amani , Nicolas Mario Baldwin , Amin Mansouri , Martin Josifoski , Maxime Peyrard , Robert West

Sparse autoencoders (SAEs) promise a unified approach for mechanistic interpretability, concept discovery, and model steering in LLMs and LVLMs. However, realizing this potential requires learned features to be both interpretable and…

Machine Learning · Computer Science 2026-04-01 Akshay Kulkarni , Tsui-Wei Weng , Vivek Narayanaswamy , Shusen Liu , Wesam A. Sakla , Kowshik Thopalli

Sparse autoencoders (SAEs) improve interpretability in multimodal models, but it remains unclear whether SAE features form modular, composable units for reasoning-an assumption underlying many intervention-based steering methods. We test…

Artificial Intelligence · Computer Science 2026-03-27 Yunpeng Zhou

RFdiffusion is a popular and well-established model for generation of protein structures. However, this generative process offers limited insight into its internal representations and how they contribute to the final protein structure.…

Quantitative Methods · Quantitative Biology 2025-12-01 Wojciech Zarzecki , Paulina Szymczak , Ewa Szczurek , Kamil Deja

Vision-language models learn powerful multimodal embeddings, yet their internal semantics remain opaque. While sparse autoencoders (SAEs) can extract interpretable features, they rely on expanding the representation dimension, which…

Computer Vision and Pattern Recognition · Computer Science 2026-05-22 Piotr Kubaty , Patryk Marszałek , Łukasz Struski , Adam Wróbel , Jacek Tabor , Marek Śmieja

Sparse autoencoders (SAEs) are a popular method for decomposing Large Langage Models (LLM) activations into interpretable latents. However, due to their substantial training cost, most academic research uses open-source SAEs which are only…

Machine Learning · Computer Science 2025-06-13 Patrick Leask , Neel Nanda , Noura Al Moubayed

The Universality Hypothesis in large language models (LLMs) claims that different models converge towards similar concept representations in their latent spaces. Providing evidence for this hypothesis would enable researchers to exploit…

Machine Learning · Computer Science 2025-05-22 Michael Lan , Philip Torr , Austin Meek , Ashkan Khakzar , David Krueger , Fazl Barez

Sparse autoencoders have become a standard tool for uncovering interpretable latent representations in neural networks. Yet salient concepts often span manifolds that current linear methods cannot capture without post hoc analysis. This…

Machine Learning · Computer Science 2026-05-12 Thomas Dooms , Ward Gauderis , Geraint Wiggins , Jose Oramas

Autoencoding is a popular method in representation learning. Conventional autoencoders employ symmetric encoding-decoding procedures and a simple Euclidean latent space to detect hidden low-dimensional structures in an unsupervised way.…

Machine Learning · Computer Science 2024-10-07 Stefan C. Schonsheck , Scott Mahan , Timo Klock , Alexander Cloninger , Rongjie Lai
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