English
Related papers

Related papers: CT-IDP: Segmentation-Derived Quantitative Phenotyp…

200 papers

Deep learning has shown great promise in the ability to automatically annotate organs in magnetic resonance imaging (MRI) scans, for example, of the brain. However, despite advancements in the field, the ability to accurately segment…

Image and Video Processing · Electrical Eng. & Systems 2024-03-26 Cosmin Ciausu , Deepa Krishnaswamy , Benjamin Billot , Steve Pieper , Ron Kikinis , Andrey Fedorov

Bone segmentation from CT images is a task that has been worked on for decades. It is an important ingredient to several diagnostics or treatment planning approaches and relevant to various diseases. As high-quality manual and…

Computer Vision and Pattern Recognition · Computer Science 2018-04-04 André Klein , Jan Warszawski , Jens Hillengaß , Klaus H. Maier-Hein

Organ segmentation of medical images is a key step in virtual imaging trials. However, organ segmentation datasets are limited in terms of quality (because labels cover only a few organs) and quantity (since case numbers are limited). In…

Image and Video Processing · Electrical Eng. & Systems 2022-03-07 Fakrul Islam Tushar , Husam Nujaim , Wanyi Fu , Ehsan Abadi , Maciej A. Mazurowski , Ehsan Samei , William P. Segars , Joseph Y. Lo

Computed Tomography (CT) is one of the most popular modalities for medical imaging. By far, CT images have contributed to the largest publicly available datasets for volumetric medical segmentation tasks, covering full-body anatomical…

Image and Video Processing · Electrical Eng. & Systems 2024-11-25 Jin Ye , Ying Chen , Yanjun Li , Haoyu Wang , Zhongying Deng , Ziyan Huang , Yanzhou Su , Chenglong Ma , Yuanfeng Ji , Junjun He

Segmentation of multiple organs-at-risk (OARs) is essential for radiation therapy treatment planning and other clinical applications. We developed an Automated deep Learning-based Abdominal Multi-Organ segmentation (ALAMO) framework based…

Image and Video Processing · Electrical Eng. & Systems 2020-08-25 Yuhua Chen , Dan Ruan , Jiayu Xiao , Lixia Wang , Bin Sun , Rola Saouaf , Wensha Yang , Debiao Li , Zhaoyang Fan

Body composition assessment using CT images can potentially be used for a number of clinical applications, including the prognostication of cardiovascular outcomes, evaluation of metabolic health, monitoring of disease progression,…

Image and Video Processing · Electrical Eng. & Systems 2025-11-24 Yaqian Chen , Hanxue Gu , Yuwen Chen , Jichen Yang , Haoyu Dong , Joseph Y. Cao , Adrian Camarena , Christopher Mantyh , Roy Colglazier , Maciej A. Mazurowski

Purpose: This study evaluated the out-of-domain performance and generalization capabilities of automated medical image segmentation models, with a particular focus on adaptation to new image acquisitions and disease type. Materials:…

Image and Video Processing · Electrical Eng. & Systems 2023-07-28 Timothy L. Kline , Sumana Ramanathan , Harrison C. Gottlich , Panagiotis Korfiatis , Adriana V. Gregory

Purpose. To alleviate the manual contouring burden, deep learning (DL) based automated contouring has been explored. However, due to the poor contrast resolution of preclinical irradiator CBCT, these methods have been limited to high…

Medical Physics · Physics 2024-02-06 Ethan Cramer , Sophie Dobiasch , Xinmin Liu , Stephanie E. Combs , Rodney D. Wiersma

While contrast-enhanced CT (CECT) is standard for assessing abdominal aortic aneurysms (AAA), the required iodinated contrast agents pose significant risks, including nephrotoxicity, patient allergies, and environmental harm. To reduce…

Computer Vision and Pattern Recognition · Computer Science 2025-12-08 Yuxuan Ou , Ning Bi , Jiazhen Pan , Jiancheng Yang , Boliang Yu , Usama Zidan , Regent Lee , Vicente Grau

Accurate fetal brain segmentation is crucial for extracting biomarkers and assessing neurodevelopment, especially in conditions such as corpus callosum dysgenesis (CCD), which can induce drastic anatomical changes. However, the rarity of…

Computer Vision and Pattern Recognition · Computer Science 2025-10-03 Marina Grifell i Plana , Vladyslav Zalevskyi , Léa Schmidt , Yvan Gomez , Thomas Sanchez , Vincent Dunet , Mériam Koob , Vanessa Siffredi , Meritxell Bach Cuadra

In recent years, "U-shaped" neural networks featuring encoder and decoder structures have gained popularity in the field of medical image segmentation. Various variants of this model have been developed. Nevertheless, the evaluation of…

Image and Video Processing · Electrical Eng. & Systems 2023-06-02 Qi Ye , Lihua Guo

Accurate and robust abdominal multi-organ segmentation from CT imaging of different modalities is a challenging task due to complex inter- and intra-organ shape and appearance variations among abdominal organs. In this paper, we propose a…

Image and Video Processing · Electrical Eng. & Systems 2022-08-03 Minfeng Xu , Heng Guo , Jianfeng Zhang , Ke Yan , Le Lu

This paper investigates the application of unsupervised learning methods for computed tomography (CT) reconstruction. To motivate our work, we review several existing priors, namely the truncated Gaussian prior, the $l_1$ prior, the total…

Image and Video Processing · Electrical Eng. & Systems 2023-06-02 Chen Cheng , Qingping Zhou

With the unprecedented developments in deep learning, automatic segmentation of main abdominal organs seems to be a solved problem as state-of-the-art (SOTA) methods have achieved comparable results with inter-rater variability on many…

Computer Vision and Pattern Recognition · Computer Science 2021-07-22 Jun Ma , Yao Zhang , Song Gu , Cheng Zhu , Cheng Ge , Yichi Zhang , Xingle An , Congcong Wang , Qiyuan Wang , Xin Liu , Shucheng Cao , Qi Zhang , Shangqing Liu , Yunpeng Wang , Yuhui Li , Jian He , Xiaoping Yang

Abdominal multi-organ segmentation of computed tomography (CT) images has been the subject of extensive research interest. It presents a substantial challenge in medical image processing, as the shape and distribution of abdominal organs…

Computer Vision and Pattern Recognition · Computer Science 2020-02-12 Yuchen Xu , Olivia Tang , Yucheng Tang , Ho Hin Lee , Yunqiang Chen , Dashan Gao , Shizhong Han , Riqiang Gao , Michael R. Savona , Richard G. Abramson , Yuankai Huo , Bennett A. Landman

In CT angiography, the accurate segmentation of abdominal aortic aneurysms (AAAs) is difficult due to large anatomical variability, low-contrast vessel boundaries, and the close proximity of organs whose intensities resemble vascular…

Computer Vision and Pattern Recognition · Computer Science 2026-04-14 Osamah Sufyan , Martin Brückmann , Ralph Wickenhöfer , Babette Dellen , Uwe Jaekel

Organ segmentation is a prerequisite for a computer-aided diagnosis (CAD) system to detect pathologies and perform quantitative analysis. For anatomically high-variability abdominal organs such as the pancreas, previous segmentation works…

Computer Vision and Pattern Recognition · Computer Science 2014-08-01 Amal Farag , Le Lu , Evrim Turkbey , Jiamin Liu , Ronald M. Summers

Fully-convolutional neural networks have achieved superior performance in a variety of image segmentation tasks. However, their training requires laborious manual annotation of large datasets, as well as acceleration by parallel processors…

Neural and Evolutionary Computing · Computer Science 2018-11-29 Blaine Rister , Darvin Yi , Kaushik Shivakumar , Tomomi Nobashi , Daniel L. Rubin

Foundation segmentation models such as the Segment Anything Model (SAM) have demonstrated strong generalization across natural images; however, their robustness under clinically realistic medical imaging domain shifts remains insufficiently…

Image and Video Processing · Electrical Eng. & Systems 2026-04-29 Sanghati Basu

Accurate delineation of anatomical structures in volumetric CT scans is crucial for diagnosis and treatment planning. While AI has advanced automated segmentation, current approaches typically target individual structures, creating a…