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Clinical notes in Electronic Health Records (EHR) present rich documented information of patients to inference phenotype for disease diagnosis and study patient characteristics for cohort selection. Unsupervised user embedding aims to…

Computation and Language · Computer Science 2022-03-30 Xiaolei Huang , Franck Dernoncourt , Mark Dredze

The wide adoption of Electronic Health Records (EHR) has resulted in large amounts of clinical data becoming available, which promises to support service delivery and advance clinical and informatics research. Deep learning techniques have…

Machine Learning · Computer Science 2022-02-14 Thanh Nguyen-Duc , Natasha Mulligan , Gurdeep S. Mannu , Joao H. Bettencourt-Silva

Computer-aided diagnosis via deep learning relies on large-scale annotated data sets, which can be costly when involving expert knowledge. Semi-supervised learning (SSL) mitigates this challenge by leveraging unlabeled data. One effective…

Machine Learning · Computer Science 2020-05-25 Prashnna Kumar Gyawali , Sandesh Ghimire , Pradeep Bajracharya , Zhiyuan Li , Linwei Wang

Understanding semantic similarity among images is the core of a wide range of computer vision applications. An important step towards this goal is to collect and learn human perceptions. Interestingly, the semantic context of images is…

Computer Vision and Pattern Recognition · Computer Science 2017-09-19 Qiong Zeng , Baoquan Chen , Yanir Kleiman , Daniel Cohen-Or , Yangyan Li

Large Language Models (LLMs) have achieved impressive performance through Supervised Fine-tuning (SFT) on diverse instructional datasets. When training on multiple capabilities simultaneously, the mixture training dataset, governed by…

Artificial Intelligence · Computer Science 2025-05-20 Chenlin Ming , Chendi Qu , Mengzhang Cai , Qizhi Pei , Zhuoshi Pan , Yu Li , Xiaoming Duan , Lijun Wu , Conghui He

Resting-state functional MRI (rs-fMRI) is increasingly employed in multi-site research to aid neurological disorder analysis. Existing studies usually suffer from significant cross-site/domain data heterogeneity caused by site effects such…

Computer Vision and Pattern Recognition · Computer Science 2023-08-25 Yuqi Fang , Jinjian Wu , Qianqian Wang , Shijun Qiu , Andrea Bozoki , Huaicheng Yan , Mingxia Liu

In a previous work \citep{luo2016sparse2d_spej}, the authors proposed an ensemble-based 4D seismic history matching (SHM) framework, which has some relatively new ingredients, in terms of the type of seismic data in choice, the way to…

Data Analysis, Statistics and Probability · Physics 2018-03-13 Xiaodong Luo , Tuhin Bhakta , Morten Jakobsen , Geir Nævdal

An applied problem facing all areas of data science is harmonizing data sources. Joining data from multiple origins with unmapped and only partially overlapping features is a prerequisite to developing and testing robust, generalizable…

The Semantic Layered Embedding Diffusion (SLED) mechanism redefines the representation of hierarchical semantics within transformer-based architectures, enabling enhanced contextual consistency across a wide array of linguistic tasks. By…

Computation and Language · Computer Science 2025-03-26 Irin Kabakum , Thomas Montgomery , Daniel Ravenwood , Genevieve Harrington

Knowledge graph embedding (KGE) has become a fundamental technique for representation learning on multi-relational data. Many seminal models, such as TransE, operate in an unbounded Euclidean space, which presents inherent limitations in…

Machine Learning · Computer Science 2025-11-05 Xuan-Truong Quan , Xuan-Son Quan , Duc Do Minh , Vinh Nguyen Van

With the increasing availability of diverse data types, particularly images and time series data from medical experiments, there is a growing demand for techniques designed to combine various modalities of data effectively. Our motivation…

Image and Video Processing · Electrical Eng. & Systems 2024-05-27 Ali Rasekh , Reza Heidari , Amir Hosein Haji Mohammad Rezaie , Parsa Sharifi Sedeh , Zahra Ahmadi , Prasenjit Mitra , Wolfgang Nejdl

Visual-semantic embedding models have been recently proposed and shown to be effective for image classification and zero-shot learning, by mapping images into a continuous semantic label space. Although several approaches have been proposed…

Computer Vision and Pattern Recognition · Computer Science 2015-12-23 Zhou Ren , Hailin Jin , Zhe Lin , Chen Fang , Alan Yuille

Representation learning on electronic health records (EHRs) plays a vital role in downstream medical prediction tasks. Although natural language processing techniques, such as recurrent neural networks, and self-attention, have been adapted…

Artificial Intelligence · Computer Science 2026-01-12 Xueping Peng , Guodong Long , Tao Shen , Sen Wang , Chengqi Zhang , Allison Clarke , Clement Schlegel

Stochastic Neighbor Embedding (SNE) methods minimize the divergence between the similarity matrix of a high-dimensional data set and its counterpart from a low-dimensional embedding, leading to widely applied tools for data visualization.…

Machine Learning · Computer Science 2018-09-13 Yao Lu , Jukka Corander , Zhirong Yang

Pretraining multimodal models on Electronic Health Records (EHRs) provides a means of learning representations that can transfer to downstream tasks with minimal supervision. Recent multimodal models induce soft local alignments between…

Machine Learning · Computer Science 2023-02-27 Denis Jered McInerney , Geoffrey Young , Jan-Willem van de Meent , Byron C. Wallace

Electronic health record (EHR) data are increasingly used to support real-world evidence (RWE) studies. Yet its ability to generate reliable RWE is limited by the lack of readily available precise information on the timing of clinical…

Plasmode simulation has become an important tool for evaluating the operating characteristics of different statistical methods in complex settings, such as pharmacoepidemiological studies of treatment effectiveness using electronic health…

Conventional machine learning models, particularly tree-based approaches, have demonstrated promising performance across various clinical prediction tasks using electronic health record (EHR) data. Despite their strengths, these models…

Computation and Language · Computer Science 2025-05-26 Sara Ketabi , Dhanesh Ramachandram

In recent years, hyperspectral imaging, also known as imaging spectroscopy, has been paid an increasing interest in geoscience and remote sensing community. Hyperspectral imagery is characterized by very rich spectral information, which…

Computer Vision and Pattern Recognition · Computer Science 2020-07-20 Danfeng Hong , Jing Yao , Xin Wu , Jocelyn Chanussot , Xiao Xiang Zhu

The current state-of-the-art image-sentence retrieval methods implicitly align the visual-textual fragments, like regions in images and words in sentences, and adopt attention modules to highlight the relevance of cross-modal semantic…

Computer Vision and Pattern Recognition · Computer Science 2021-08-06 Xuri Ge , Fuhai Chen , Joemon M. Jose , Zhilong Ji , Zhongqin Wu , Xiao Liu