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The rapid digitization of real-world data presents an unprecedented opportunity to optimize healthcare delivery and accelerate biomedical discovery. However, these data are often found in unstructured forms such as clinical notes in…

The extraction of critical patient information from Electronic Health Records (EHRs) poses significant challenges due to the complexity and unstructured nature of the data. Traditional machine learning approaches often fail to capture…

Computation and Language · Computer Science 2025-09-03 Zhimeng Luo , Abhibha Gupta , Adam Frisch , Daqing He

The core of knowledge distillation lies in transferring the teacher's rich 'dark knowledge'-subtle probabilistic patterns that reveal how classes are related and the distribution of uncertainties. While this idea is well established,…

Machine Learning · Computer Science 2026-05-19 Jeonghyun Kim , SooKyung Kim , Richeng Xuan , Hyunsoo Cho

Deep neural networks lack interpretability and tend to be overconfident, which poses a serious problem in safety-critical applications like autonomous driving, medical imaging, or machine vision tasks with high demands on reliability.…

Computer Vision and Pattern Recognition · Computer Science 2024-03-27 Steven Landgraf , Kira Wursthorn , Markus Hillemann , Markus Ulrich

Automated radiology report drafting (ARRD) using vision-language models (VLMs) has advanced rapidly, yet most systems lack explicit uncertainty estimates, limiting trust and safe clinical deployment. We propose CONRep, a model-agnostic…

Background: Widespread adoption of electronic health records (EHRs) has enabled secondary use of EHR data for clinical research and healthcare delivery. Natural language processing (NLP) techniques have shown promise in their capability to…

Information Retrieval · Computer Science 2021-06-15 Sijia Liu , Yanshan Wang , Andrew Wen , Liwei Wang , Na Hong , Feichen Shen , Steven Bedrick , William Hersh , Hongfang Liu

Cardiac magnetic resonance imaging (CMR) has emerged as a valuable diagnostic tool for cardiac diseases. However, a limitation of CMR is its slow imaging speed, which causes patient discomfort and introduces artifacts in the images. There…

Explainable disease diagnosis, which leverages patient information (e.g., signs and symptoms) and computational models to generate probable diagnoses and reasonings, offers clear clinical values. However, when clinical notes encompass…

We introduce Med-CTX, a fully transformer based multimodal framework for explainable breast cancer ultrasound segmentation. We integrate clinical radiology reports to boost both performance and interpretability. Med-CTX achieves exact…

Computer Vision and Pattern Recognition · Computer Science 2025-08-20 Enobong Adahada , Isabel Sassoon , Kate Hone , Yongmin Li

Breast ultrasound is essential for detecting and diagnosing abnormalities, with radiology reports summarizing key findings like lesion characteristics and malignancy assessments. Extracting this critical information is challenging due to…

Computation and Language · Computer Science 2024-08-22 Yuxuan Chen , Haoyan Yang , Hengkai Pan , Fardeen Siddiqui , Antonio Verdone , Qingyang Zhang , Sumit Chopra , Chen Zhao , Yiqiu Shen

Large language models (LLMs) have shown impressive performance on general-purpose tasks, yet adapting them to specific domains remains challenging due to the scarcity of high-quality domain data. Existing data synthesis tools often struggle…

Computation and Language · Computer Science 2025-07-08 Ziyang Miao , Qiyu Sun , Jingyuan Wang , Yuchen Gong , Yaowei Zheng , Shiqi Li , Richong Zhang

Large Language Models (LLMs) are increasingly employed in real-world applications, driving the need to evaluate the trustworthiness of their generated text. To this end, reliable uncertainty estimation is essential. Leading uncertainty…

Machine Learning · Computer Science 2026-04-21 Lukas Aichberger , Kajetan Schweighofer , Sepp Hochreiter

Accurately identifying student misconceptions is crucial for personalized education but faces three challenges: (1) data scarcity with long-tail distribution, where authentic student reasoning is difficult to synthesize; (2) fuzzy…

Machine Learning · Computer Science 2026-05-15 Qirui Liu , Hao Chen , Weijie Shi , Jiajie Xu , Jia Zhu

Considering uncertainty estimation of modern neural networks (NNs) is one of the most important steps towards deploying machine learning systems to meaningful real-world applications such as in medicine, finance or autonomous systems. At…

Machine Learning · Computer Science 2022-05-20 Martin Ferianc , Miguel Rodrigues

Recently, an alternative measure of uncertainty called cumulative residual extropy (CREX) was proposed by Jahanshahi et al. (2019). In this paper, we consider uncertainty measures of minimum ranked set sampling procedure with unequal…

Statistics Theory · Mathematics 2020-08-21 Mohammad Reza Kazemia , Saeid Tahmasebib , Camilla Calì , Maria Longobardi

The rapid advancement of large language models (LLMs) demands robust, unbiased, and scalable evaluation methods. However, human annotations are costly to scale, model-based evaluations are susceptible to stylistic biases, and…

Medical images are increasingly used as input to deep neural networks to produce quantitative values that aid researchers and clinicians. However, standard deep neural networks do not provide a reliable measure of uncertainty in those…

Image and Video Processing · Electrical Eng. & Systems 2020-02-19 Jacob C. Reinhold , Yufan He , Shizhong Han , Yunqiang Chen , Dashan Gao , Junghoon Lee , Jerry L. Prince , Aaron Carass

Extractive summarization plays a pivotal role in natural language processing due to its wide-range applications in summarizing diverse content efficiently, while also being faithful to the original content. Despite significant advancement…

Computation and Language · Computer Science 2024-07-09 Mihir Parmar , Hanieh Deilamsalehy , Franck Dernoncourt , Seunghyun Yoon , Ryan A. Rossi , Trung Bui

As the volume of scientific literature grows, efficient knowledge organization becomes increasingly challenging. Traditional approaches to structuring scientific content are time-consuming and require significant domain expertise,…

Digital Libraries · Computer Science 2026-03-17 Lena John , Ahmed Malek Ghanmi , Tim Wittenborg , Sören Auer , Oliver Karras

Electronic health records (EHRs) are designed to synthesize diverse data types, including unstructured clinical notes, structured lab tests, and time-series visit data. Physicians draw on these multimodal and temporal sources of EHR data to…