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We propose a novel neural deformable model (NDM) targeting at the reconstruction and modeling of 3D bi-ventricular shape of the heart from 2D sparse cardiac magnetic resonance (CMR) imaging data. We model the bi-ventricular shape using…

Computer Vision and Pattern Recognition · Computer Science 2024-11-25 Meng Ye , Dong Yang , Mikael Kanski , Leon Axel , Dimitris Metaxas

Computational image reconstruction algorithms generally produce a single image without any measure of uncertainty or confidence. Regularized Maximum Likelihood (RML) and feed-forward deep learning approaches for inverse problems typically…

Machine Learning · Computer Science 2020-12-18 He Sun , Katherine L. Bouman

Echocardiography plays a fundamental role in the extraction of important clinical parameters (e.g. left ventricular volume and ejection fraction) required to determine the presence and severity of heart-related conditions. When deploying…

Computer Vision and Pattern Recognition · Computer Science 2025-02-19 Thierry Judge , Olivier Bernard , Woo-Jin Cho Kim , Alberto Gomez , Arian Beqiri , Agisilaos Chartsias , Pierre-Marc Jodoin

We present a novel learned image reconstruction method for accelerated cardiac MRI with multiple receiver coils based on deep convolutional neural networks (CNNs) and algorithm unrolling. In contrast to many existing learned MR image…

Image and Video Processing · Electrical Eng. & Systems 2024-10-08 Felix Frederik Zimmermann , Andreas Kofler

A signed distance function (SDF) as the 3D shape description is one of the most effective approaches to represent 3D geometry for rendering and reconstruction. Our work is inspired by the state-of-the-art method DeepSDF that learns and…

Computer Vision and Pattern Recognition · Computer Science 2021-08-20 Shun Yao , Fei Yang , Yongmei Cheng , Mikhail G. Mozerov

We present a novel method, called NeuralUDF, for reconstructing surfaces with arbitrary topologies from 2D images via volume rendering. Recent advances in neural rendering based reconstruction have achieved compelling results. However,…

Computer Vision and Pattern Recognition · Computer Science 2022-11-28 Xiaoxiao Long , Cheng Lin , Lingjie Liu , Yuan Liu , Peng Wang , Christian Theobalt , Taku Komura , Wenping Wang

Cine cardiac magnetic resonance (CMR) imaging is recognised as the benchmark modality for the comprehensive assessment of cardiac function. Nevertheless, the acquisition process of cine CMR is considered as an impediment due to its…

Image and Video Processing · Electrical Eng. & Systems 2024-04-11 Anam Hashmi , Julia Dietlmeier , Kathleen M. Curran , Noel E. O'Connor

Deep unrolling is an emerging deep learning-based image reconstruction methodology that bridges the gap between model-based and purely deep learning-based image reconstruction methods. Although deep unrolling methods achieve…

Image and Video Processing · Electrical Eng. & Systems 2022-12-21 Canberk Ekmekci , Mujdat Cetin

Active solids are a large class of materials, including both living soft tissues and artificial matter, that share the ability to undergo strain even in absence of external loads. While in engineered materials the actuation is typically…

Medical Physics · Physics 2024-06-28 Giulia Pozzi , Davide Ambrosi , Simone Pezzuto

Cardiac segmentation of atriums, ventricles, and myocardium in computed tomography (CT) images is an important first-line task for presymptomatic cardiovascular disease diagnosis. In several recent studies, deep learning models have shown…

Image and Video Processing · Electrical Eng. & Systems 2024-10-01 Sanguk Park , Minyoung Chung

The performance of deep learning (DL) methods for the analysis of cine cardiovascular magnetic resonance (CMR) is typically assessed in terms of accuracy, overlooking precision. In this work, uncertainty estimation techniques, namely deep…

Computer Vision and Pattern Recognition · Computer Science 2026-03-31 Dewmini Hasara Wickremasinghe , Michelle Gibogwe , Andrew Bell , Esther Puyol-Antón , Muhummad Sohaib Nazir , Reza Razavi , Bruno Paun , Paul Aljabar , Andrew P. King

In recent years, machine learning (ML) based reconstruction has been widely investigated and employed in cardiac magnetic resonance (CMR) imaging. ML-based reconstructions can deliver clinically acceptable image quality under substantially…

Image and Video Processing · Electrical Eng. & Systems 2024-11-18 Chi Zhang , Michael Loecher , Cagan Alkan , Mahmut Yurt , Shreyas S. Vasanawala , Daniel B. Ennis

We propose a novel approach to generate samples from the conditional distribution of patient-specific cardiovascular models given a clinically aquired image volume. A convolutional neural network architecture with dropout layers is first…

Quantitative Methods · Quantitative Biology 2021-09-01 Gabriel Maher , Casey Fleeter , Daniele Schiavazzi , Alison Marsden

Neural signed distance functions (SDFs) have been a vital representation to represent 3D shapes or scenes with neural networks. An SDF is an implicit function that can query signed distances at specific coordinates for recovering a 3D…

Computer Vision and Pattern Recognition · Computer Science 2025-11-19 Qiang Bai , Bojian Wu , Xi Yang , Zhizhong Han

In cardiac magnetic resonance (CMR) imaging, a 3D high-resolution segmentation of the heart is essential for detailed description of its anatomical structures. However, due to the limit of acquisition duration and respiratory/cardiac…

Image and Video Processing · Electrical Eng. & Systems 2021-07-09 Shuo Wang , Chen Qin , Nicolo Savioli , Chen Chen , Declan O'Regan , Stuart Cook , Yike Guo , Daniel Rueckert , Wenjia Bai

Deep learning (DL) models are capable of successfully exploiting latent representations in MR data and have become state-of-the-art for accelerated MRI reconstruction. However, undersampling the measurements in k-space as well as the over-…

Image and Video Processing · Electrical Eng. & Systems 2023-03-09 Mevan Ekanayake , Kamlesh Pawar , Gary Egan , Zhaolin Chen

Accurate segmentation and motion estimation of myocardium have always been important in clinic field, which essentially contribute to the downstream diagnosis. However, existing methods cannot always guarantee the shape integrity for…

Computer Vision and Pattern Recognition · Computer Science 2022-07-22 Xiaoling Hu , Xiao Chen , Yikang Liu , Eric Z. Chen , Terrence Chen , Shanhui Sun

3D motion estimation from cine cardiac magnetic resonance (CMR) images is important for the assessment of cardiac function and the diagnosis of cardiovascular diseases. Current state-of-the art methods focus on estimating dense…

Image and Video Processing · Electrical Eng. & Systems 2023-09-26 Qingjie Meng , Wenjia Bai , Declan P O'Regan , and Daniel Rueckert

In recent years, the neural implicit surface has emerged as a powerful representation for multi-view surface reconstruction due to its simplicity and state-of-the-art performance. However, reconstructing smooth and detailed surfaces in…

Computer Vision and Pattern Recognition · Computer Science 2024-07-12 Yuting Xiao , Jingwei Xu , Zehao Yu , Shenghua Gao

Cardiac magnetic resonance imaging (MRI) requires reconstructing a real-time video of a beating heart from continuous highly under-sampled measurements. This task is challenging since the object to be reconstructed (the heart) is…

Image and Video Processing · Electrical Eng. & Systems 2024-01-12 Johannes F. Kunz , Stefan Ruschke , Reinhard Heckel