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Modern day Language Models see extensive use in text classification, yet this comes at significant computational cost. Compute-effective classification models are needed for low-resource environments, most notably on edge devices. We…

Machine Learning · Computer Science 2024-11-22 Stan Loosmore , Alexander Titus

Quantitative Structure-Activity Relationship (QSAR) modeling is a cornerstone of computational drug discovery. This research demonstrates the successful application of a Quantum Multiple Kernel Learning (QMKL) framework to enhance QSAR…

Quantum Physics · Physics 2025-12-17 Alejandro Giraldo , Daniel Ruiz , Mariano Caruso , Javier Mancilla , Guido Bellomo

Deep neural networks are used for a wide range of regression problems. However, there exists a significant gap in accuracy between specialized approaches and generic direct regression in which a network is trained by minimizing the squared…

Machine Learning · Computer Science 2022-12-06 Deval Shah , Zi Yu Xue , Tor M. Aamodt

Accurate prediction of protein-ligand binding affinities is an essential challenge in structure-based drug design. Despite recent advances in data-driven methods for affinity prediction, their accuracy is still limited, partially because…

Biomolecules · Quantitative Biology 2024-09-04 Yaosen Min , Ye Wei , Peizhuo Wang , Xiaoting Wang , Han Li , Nian Wu , Stefan Bauer , Shuxin Zheng , Yu Shi , Yingheng Wang , Ji Wu , Dan Zhao , Jianyang Zeng

Large-scale pre-training methodologies for chemical language models represent a breakthrough in cheminformatics. These methods excel in tasks such as property prediction and molecule generation by learning contextualized representations of…

Machine Learning · Computer Science 2025-07-18 Eduardo Soares , Victor Shirasuna , Emilio Vital Brazil , Renato Cerqueira , Dmitry Zubarev , Kristin Schmidt

The efficacy of deep learning depends on large-scale data sets that have been carefully curated with reliable data acquisition and annotation processes. However, acquiring such large-scale data sets with precise annotations is very…

Machine Learning · Computer Science 2020-11-12 Ragav Sachdeva , Filipe R. Cordeiro , Vasileios Belagiannis , Ian Reid , Gustavo Carneiro

Deep Learning (DL) algorithms have shown impressive performance in diverse domains. Among them, audio has attracted many researchers over the last couple of decades due to some interesting patterns--particularly in classification of audio…

Sound · Computer Science 2022-06-16 Muhammad Turab , Teerath Kumar , Malika Bendechache , Takfarinas Saber

The application of Machine Learning (ML) in Electronic Design Automation (EDA) for Very Large-Scale Integration (VLSI) design has garnered significant research attention. Despite the requirement for extensive datasets to build effective ML…

Machine Learning · Computer Science 2025-07-08 Jingyu Pan , Chen-Chia Chang , Zhiyao Xie , Yiran Chen , Hai Li

Deep learning has achieved unprecedented success in various object detection tasks with huge amounts of labeled data. However, obtaining large-scale annotations for medical images is extremely challenging due to the high demand of labour…

Image and Video Processing · Electrical Eng. & Systems 2022-03-21 Zhizhong Chai , Luyang Luo , Huangjing Lin , Hao Chen , Anjia Han , Pheng-Ann Heng

Learning from noisy data has attracted much attention, where most methods focus on closed-set label noise. However, a more common scenario in the real world is the presence of both open-set and closed-set noise. Existing methods typically…

Machine Learning · Computer Science 2024-02-26 Wenhai Wan , Xinrui Wang , Ming-Kun Xie , Shao-Yuan Li , Sheng-Jun Huang , Songcan Chen

Knowledge Distillation (KD) has been used in image classification for model compression. However, rare studies apply this technology on single-stage object detectors. Focal loss shows that the accumulated errors of easily-classified samples…

Computer Vision and Pattern Recognition · Computer Science 2019-01-15 Shitao Tang , Litong Feng , Wenqi Shao , Zhanghui Kuang , Wei Zhang , Yimin Chen

Deep learning has significantly advanced molecular modeling and design, enabling efficient understanding and discovery of novel molecules. In particular, large language models (LLMs) introduce a fresh research paradigm to tackle scientific…

Machine Learning · Computer Science 2025-01-06 Pengfei Liu , Jun Tao , Zhixiang Ren

In the real world, a molecule is a 3D geometric structure. Compared to 1D SMILES sequences and 2D molecular graphs, 3D molecules represent the most informative molecular modality. Despite the rapid progress of autoregressive-based language…

Computational Engineering, Finance, and Science · Computer Science 2025-08-15 Lei Jiang , Shuzhou Sun , Biqing Qi , Yuchen Fu , Xiaohua Xu , Yuqiang Li , Dongzhan Zhou , Tianfan Fu

Conditional density estimation is a general framework for solving various problems in machine learning. Among existing methods, non-parametric and/or kernel-based methods are often difficult to use on large datasets, while methods based on…

Machine Learning · Statistics 2018-06-06 Hiroaki Sasaki , Aapo Hyvärinen

Reading emotions precisely from segments of neural activity is crucial for the development of emotional brain-computer interfaces. Among all neural decoding algorithms, deep learning (DL) holds the potential to become the most promising…

Human-Computer Interaction · Computer Science 2023-03-09 Xinming Wu , Ji Dai

We present SynCABEL (Synthetic Contextualized Augmentation for Biomedical Entity Linking), a framework that addresses a central bottleneck in supervised biomedical entity linking (BEL): the scarcity of expert-annotated training data.…

Computation and Language · Computer Science 2026-05-19 Adam Remaki , Christel Gérardin , Eulàlia Farré-Maduell , Martin Krallinger , Xavier Tannier

Chemical language models (CLMs) are prominent for their effectiveness in exploring chemical space and enabling molecular engineering. However, while exploring chemical-linguistic space, CLMs suffer from the gap between natural language and…

Computational Engineering, Finance, and Science · Computer Science 2025-01-07 Liuzhenghao Lv , Hao Li , Yu Wang , Zhiyuan Yan , Zijun Chen , Zongying Lin , Li Yuan , Yonghong Tian

Quantum many-body problems are central to various scientific disciplines, yet their ground-state properties are intrinsically challenging to estimate. Recent advances in deep learning (DL) offer potential solutions in this field,…

Quantum Physics · Physics 2025-10-01 Xinbiao Wang , Yuxuan Du , Zihan Lou , Yang Qian , Kaining Zhang , Yong Luo , Bo Du , Dacheng Tao

With their growing capabilities, generative large language models (LLMs) are being increasingly investigated for complex medical tasks. However, their effectiveness in real-world clinical applications remains underexplored. To address this,…

Computation and Language · Computer Science 2026-01-27 Paul Grundmann , Dennis Fast , Jan Frick , Thomas Steffek , Felix Gers , Wolfgang Nejdl , Alexander Löser

Solving real-world problems, particularly with deep learning, relies on the availability of abundant, quality data. In this paper we develop a novel framework that maximises the utility of time-series datasets that contain only small…

Machine Learning · Computer Science 2019-06-04 Ivan Kiskin , Udeepa Meepegama , Steven Roberts
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