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One of the biggest challenges for deep learning algorithms in medical image analysis is the indiscriminate mixing of image properties, e.g. artifacts and anatomy. These entangled image properties lead to a semantically redundant feature…

Machine Learning · Computer Science 2019-08-22 Qingjie Meng , Nick Pawlowski , Daniel Rueckert , Bernhard Kainz

Supervised deep learning needs a large amount of labeled data to achieve high performance. However, in medical imaging analysis, each site may only have a limited amount of data and labels, which makes learning ineffective. Federated…

Image and Video Processing · Electrical Eng. & Systems 2022-08-09 Yawen Wu , Dewen Zeng , Zhepeng Wang , Yiyu Shi , Jingtong Hu

Masked autoencoders (MAEs) have recently shown promise for self-supervised representation learning of resting-state brain functional connectivity (FC). However, a fundamental question remains unresolved: how should FC matrices be tokenized…

Artificial Intelligence · Computer Science 2026-05-20 Leo Milecki , Qingyu Hu , Bahram Jafrasteh , Mert R. Sabuncu , Qingyu Zhao

Although deep learning models in medical imaging often achieve excellent classification performance, they can rely on shortcut learning, exploiting spurious correlations or confounding factors that are not causally related to the target…

Computer Vision and Pattern Recognition · Computer Science 2026-04-15 Sarah Müller , Philipp Berens

While representation learning aims to derive interpretable features for describing visual data, representation disentanglement further results in such features so that particular image attributes can be identified and manipulated. However,…

Computer Vision and Pattern Recognition · Computer Science 2018-05-02 Yen-Cheng Liu , Yu-Ying Yeh , Tzu-Chien Fu , Sheng-De Wang , Wei-Chen Chiu , Yu-Chiang Frank Wang

Traditional deep learning methods in medical imaging often focus solely on segmentation or classification, limiting their ability to leverage shared information. Multi-task learning (MTL) addresses this by combining both tasks through…

Image and Video Processing · Electrical Eng. & Systems 2024-12-03 Phuoc-Nguyen Bui , Duc-Tai Le , Junghyun Bum , Hyunseung Choo

In the realm of neuroscience, identifying distinctive patterns associated with neurological disorders via brain networks is crucial. Resting-state functional magnetic resonance imaging (fMRI) serves as a primary tool for mapping these…

Image and Video Processing · Electrical Eng. & Systems 2025-10-27 Jiaxing Xu , Mengcheng Lan , Xia Dong , Kai He , Wei Zhang , Qingtian Bian , Yiping Ke

Brain functional connectivity (FC) extracted from resting-state fMRI (RS-fMRI) has become a popular approach for disease diagnosis, where discriminating subjects with mild cognitive impairment (MCI) from normal controls (NC) is still one of…

Computer Vision and Pattern Recognition · Computer Science 2018-08-31 Weizheng Yan , Han Zhang , Jing Sui , Dinggang Shen

Mental disorder populations exhibit pronounced heterogeneity -- that is, the significant differences between samples -- poses a significant challenge to the definition of positive pairs in contrastive learning. To address this, we propose a…

Machine Learning · Computer Science 2026-03-23 Xiaolong Li , Guiliang Guo , Guangqi Wen , Peng Cao , Jinzhu Yang , Honglin Wu , Xiaoli Liu , Fei Wang , Osmar R. Zaiane

Attributes skew hinders the current federated learning (FL) frameworks from consistent optimization directions among the clients, which inevitably leads to performance reduction and unstable convergence. The core problems lie in that: 1)…

Machine Learning · Computer Science 2022-06-15 Zhengquan Luo , Yunlong Wang , Zilei Wang , Zhenan Sun , Tieniu Tan

Multimodal MRIs play a crucial role in clinical diagnosis and treatment. Feature disentanglement (FD)-based methods, aiming at learning superior feature representations for multimodal data analysis, have achieved significant success in…

Computer Vision and Pattern Recognition · Computer Science 2025-02-28 Tianling Liu , Hongying Liu , Fanhua Shang , Lequan Yu , Tong Han , Liang Wan

Brain atlases are essential for reducing the dimensionality of neuroimaging data and enabling interpretable analysis. However, most existing atlases are predefined, group-level templates with limited flexibility and resolution. We present…

Neurons and Cognition · Quantitative Biology 2025-09-23 Mo Wang , Kaining Peng , Jingsheng Tang , Hongkai Wen , Quanying Liu

Learners sharing similar implicit cognitive states often display comparable observable problem-solving performances. Leveraging collaborative connections among such similar learners proves valuable in comprehending human learning. Motivated…

Machine Learning · Computer Science 2024-11-12 Weibo Gao , Qi Liu , Linan Yue , Fangzhou Yao , Hao Wang , Yin Gu , Zheng Zhang

The goal of the present study is to identify autism using machine learning techniques and resting-state brain imaging data, leveraging the temporal variability of the functional connections (FC) as the only information. We estimated and…

Neurons and Cognition · Quantitative Biology 2017-12-22 Ravi Tejwani , Adam Liska , Hongyuan You , Jenna Reinen , Payel Das

Functional Magnetic Resonance Imaging (fMRI) is an imaging technique widely used to study human brain activity. fMRI signals in areas across the brain transiently synchronise and desynchronise their activity in a highly structured manner,…

Machine Learning · Computer Science 2025-08-12 Yiran Huang , Amirhossein Nouranizadeh , Christine Ahrends , Mengjia Xu

Integrating the brain structural and functional connectivity features is of great significance in both exploring brain science and analyzing cognitive impairment clinically. However, it remains a challenge to effectively fuse structural and…

Neurons and Cognition · Quantitative Biology 2023-05-25 Qiankun Zuo , Baiying Lei , Ning Zhong , Yi Pan , Shuqiang Wang

Federated learning enables multiple medical institutions to train a global model without sharing data, yet feature heterogeneity from diverse scanners or protocols remains a major challenge. Many existing works attempt to address this issue…

Computer Vision and Pattern Recognition · Computer Science 2026-01-23 Xingyue Zhao , Wenke Huang , Xingguang Wang , Haoyu Zhao , Linghao Zhuang , Anwen Jiang , Guancheng Wan , Mang Ye

The intricate morphology of brain vessels poses significant challenges for automatic segmentation models, which usually focus on a single imaging modality. However, accurately treating brain-related conditions requires a comprehensive…

Computer Vision and Pattern Recognition · Computer Science 2025-10-03 Francesco Galati , Daniele Falcetta , Rosa Cortese , Ferran Prados , Ninon Burgos , Maria A. Zuluaga

Disentangled representation learning strives to extract the intrinsic factors within observed data. Factorizing these representations in an unsupervised manner is notably challenging and usually requires tailored loss functions or specific…

Computer Vision and Pattern Recognition · Computer Science 2024-06-13 Tao Yang , Cuiling Lan , Yan Lu , Nanning zheng

Federated multi-task learning (FMTL) seeks to collaboratively train customized models for users with different tasks while preserving data privacy. Most existing approaches assume model congruity (i.e., the use of fully or partially…

Machine Learning · Computer Science 2026-02-03 Mehdi Setayesh , Mahdi Beitollahi , Yasser H. Khalil , Hongliang Li