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Nuclei classification is a critical step in computer-aided diagnosis with histopathology images. In the past, various methods have employed graph neural networks (GNN) to analyze cell graphs that model inter-cell relationships by…

Computer Vision and Pattern Recognition · Computer Science 2024-02-21 Wei Lou , Guanbin Li , Xiang Wan , Haofeng Li

Named Entity Recognition (NER) in Few-Shot setting is imperative for entity tagging in low resource domains. Existing approaches only learn class-specific semantic features and intermediate representations from source domains. This affects…

Computation and Language · Computer Science 2022-03-29 Sarkar Snigdha Sarathi Das , Arzoo Katiyar , Rebecca J. Passonneau , Rui Zhang

Cognitive neuroscience research indicates that humans leverage cues to activate entity-centered memory traces (engrams) for complex, multi-hop recollection. Inspired by this mechanism, we introduce EcphoryRAG, an entity-centric knowledge…

Artificial Intelligence · Computer Science 2025-10-13 Zirui Liao

Document-level relation extraction (DocRE) aims to extract relations between entities from unstructured document text. Compared to sentence-level relation extraction, it requires more complex semantic understanding from a broader text…

Computation and Language · Computer Science 2024-09-10 Yanxu Mao , Xiaohui Chen , Peipei Liu , Tiehan Cui , Zuhui Yue , Zheng Li

End-to-end automatic speech recognition systems often fail to transcribe domain-specific named entities, causing catastrophic failures in downstream tasks. Numerous fast and lightweight named entity correction (NEC) models have been…

Computation and Language · Computer Science 2025-10-27 Yuanchang Luo , Daimeng Wei , Shaojun Li , Hengchao Shang , Jiaxin Guo , Zongyao Li , Zhanglin Wu , Xiaoyu Chen , Zhiqiang Rao , Jinlong Yang , Hao Yang

This study proposed a knowledge graph entity extraction and relationship reasoning algorithm based on a graph neural network, using a graph convolutional network and graph attention network to model the complex structure in the knowledge…

Computation and Language · Computer Science 2024-11-26 Junliang Du , Guiran Liu , Jia Gao , Xiaoxuan Liao , Jiacheng Hu , Linxiao Wu

Graphs are growing rapidly, along with the number of distinct label categories associated with them. Applications like e-commerce, healthcare, recommendation systems, and various social media platforms are rapidly moving towards graph…

Artificial Intelligence · Computer Science 2025-04-08 Aditya Hemant Shahane , Prathosh A. P , Sandeep Kumar

Retrieval-Augmented Generation (RAG) integrates non-parametric knowledge into Large Language Models (LLMs), typically from unstructured texts and structured graphs. While recent progress has advanced text-based RAG to multi-turn reasoning…

Computation and Language · Computer Science 2025-12-11 Yucan Guo , Miao Su , Saiping Guan , Zihao Sun , Xiaolong Jin , Jiafeng Guo , Xueqi Cheng

Knowledge graph completion (KGC) aims to predict the missing links among knowledge graph (KG) entities. Though various methods have been developed for KGC, most of them can only deal with the KG entities seen in the training set and cannot…

Artificial Intelligence · Computer Science 2022-11-16 Zifeng Ding , Jingpei Wu , Bailan He , Yunpu Ma , Zhen Han , Volker Tresp

This work presents a novel modeling and analysis framework for graph sequences which addresses the challenge of detecting and contextualizing anomalies in labelled, streaming graph data. We introduce a generalization of the BTER model of…

Social and Information Networks · Computer Science 2015-04-21 Robert A. Bridges , John Collins , Erik M. Ferragut , Jason Laska , Blair D. Sullivan

Graph-RAG constructs a knowledge graph from text chunks to improve retrieval in Large Language Model (LLM)-based question answering. It is particularly useful in domains such as biomedicine, law, and political science, where retrieval often…

Information Retrieval · Computer Science 2025-06-04 Yiqian Huang , Shiqi Zhang , Xiaokui Xiao

Recent GraphRAG methods integrate graph structures into text indexing and retrieval, using knowledge graph triples to connect text chunks, thereby improving retrieval coverage and precision. However, we observe that treating text chunks as…

Information Retrieval · Computer Science 2026-04-24 Yanning Hou , Duanyang Yuan , Sihang Zhou , Xiaoshu Chen , Ke Liang , Siwei Wang , Xinwang Liu , Jian Huang

Retrieval-Augmented Generation (RAG) systems enhance large language models (LLMs) by integrating external knowledge sources, enabling more accurate and contextually relevant responses tailored to user needs. However, existing RAG systems…

Information Retrieval · Computer Science 2025-04-29 Zirui Guo , Lianghao Xia , Yanhua Yu , Tu Ao , Chao Huang

Modern embedding models capture both semantic and syntactic structures of queries, often mapping different queries to similar regions in vector space. This results in non-uniform cluster access patterns in disk-based vector search systems,…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-05-05 Yeonwoo Jeong , Kyuli Park , Hyunji Cho , Sungyong Park

Retrieval-Augmented Generation (RAG) enhances language models by incorporating external knowledge at inference time. However, graph-based RAG systems often suffer from structural overhead and imprecise retrieval: they require costly…

Information Retrieval · Computer Science 2025-06-24 Jiale Zhang , Jiaxiang Chen , Zhucong Li , Jie Ding , Kui Zhao , Zenglin Xu , Xin Pang , Yinghui Xu

Given a graph with textual attributes, we enable users to `chat with their graph': that is, to ask questions about the graph using a conversational interface. In response to a user's questions, our method provides textual replies and…

Machine Learning · Computer Science 2024-05-28 Xiaoxin He , Yijun Tian , Yifei Sun , Nitesh V. Chawla , Thomas Laurent , Yann LeCun , Xavier Bresson , Bryan Hooi

Data continuously emitted from industrial ecosystems such as social or e-commerce platforms are commonly represented as heterogeneous graphs (HG) composed of multiple node/edge types. State-of-the-art graph learning methods for HGs known as…

Machine Learning · Computer Science 2022-10-14 Minji Yoon , John Palowitch , Dustin Zelle , Ziniu Hu , Ruslan Salakhutdinov , Bryan Perozzi

Large Language Models (LLMs) have achieved impressive progress in natural language processing, but their limited ability to retain long-term context constrains performance on document-level or multi-turn tasks. Retrieval-Augmented…

Computation and Language · Computer Science 2025-05-20 Zhangyu Wang , Siyuan Gao , Rong Zhou , Hao Wang , Li Ning

Large language models with retrieval-augmented generation encounter a pivotal challenge in intricate retrieval tasks, e.g., multi-hop question answering, which requires the model to navigate across multiple documents and generate…

Information Retrieval · Computer Science 2025-05-06 Weijie Chen , Ting Bai , Jinbo Su , Jian Luan , Wei Liu , Chuan Shi

This paper studies the problem of information retrieval, to adapt to unseen tasks. Existing work generates synthetic queries from domain-specific documents to jointly train the retriever. However, the conventional query generator assumes…

Computation and Language · Computer Science 2024-09-26 Yoonsang Lee , Minsoo Kim , Seung-won Hwang