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A central goal of neuroscience is to understand the representations formed by brain activity patterns and their connection to behavior. The classical approach is to investigate how individual neurons encode the stimuli and how their tuning…

Neurons and Cognition · Quantitative Biology 2021-04-21 Nikolaus Kriegeskorte , Xue-Xin Wei

Human similarity judgments are inconsistent with Euclidean, Hamming, Mahalanobis, and the majority of measures used in the extensive literatures on similarity and dissimilarity. From intrinsic properties of brain circuitry, we derive…

Neurons and Cognition · Quantitative Biology 2017-09-27 Antonio M Rodriguez , Richard Granger

The ability of the organism to distinguish between various stimuli is limited by the structure and noise in the population code of its sensory neurons. Here we infer a distance measure on the stimulus space directly from the recorded…

Neurons and Cognition · Quantitative Biology 2013-06-14 Gašper Tkačik , Einat Granot-Atedgi , Ronen Segev , Elad Schneidman

The present paper aims to develop a mathematical model concerning the visual perception of spatial information. It is a challenging problem in theoretical neuroscience to investigate how the spatial information of the objects in the…

Neurons and Cognition · Quantitative Biology 2025-05-21 Debasis Mazumdar , Kuntal Ghosh , Soma Mitra , Late Kamales Bhaumik

Similarity measures are widely used to interpret the representational geometries used by neural networks to solve tasks. Yet, because existing methods compare the extrinsic geometry of representations in state space, rather than their…

Machine Learning · Computer Science 2026-04-03 N Alex Cayco-Gajic , Arthur Pellegrino

Neurons in the brain represent information in their collective activity. The fidelity of this neural population code depends on whether and how variability in the response of one neuron is shared with other neurons. Two decades of studies…

Neurons and Cognition · Quantitative Biology 2021-02-02 Rava Azeredo da Silveira , Fred Rieke

A new Riemannian geometry for the Compound Gaussian distribution is proposed. In particular, the Fisher information metric is obtained, along with corresponding geodesics and distance function. This new geometry is applied on a change…

Machine Learning · Statistics 2020-05-21 Florent Bouchard , Ammar Mian , Jialun Zhou , Salem Said , Guillaume Ginolhac , Yannick Berthoumieu

Choosing the Fisher information as the metric tensor for a Riemannian manifold provides a powerful yet fundamental way to understand statistical distribution families. Distances along this manifold become a compelling measure of statistical…

Statistics Theory · Mathematics 2023-06-05 Brodie A. J. Lawson , Kevin Burrage , Kerrie Mengersen , Rodrigo Weber dos Santos

Biological and artificial neural systems form high-dimensional neural representations that underpin their computational capabilities. Methods for quantifying geometric similarity in neural representations have become a popular tool for…

Neurons and Cognition · Quantitative Biology 2024-12-20 Amin Nejatbakhsh , Victor Geadah , Alex H. Williams , David Lipshutz

While Shannon's mutual information has widespread applications in many disciplines, for practical applications it is often difficult to calculate its value accurately for high-dimensional variables because of the curse of dimensionality.…

Information Theory · Computer Science 2018-04-02 Wentao Huang , Kechen Zhang

Recent advances in diffusion models have demonstrated their remarkable ability to capture complex image distributions, but the geometric properties of the learned data manifold remain poorly understood. We address this gap by introducing a…

Machine Learning · Computer Science 2025-10-13 Simone Azeglio , Arianna Di Bernardo

Hippocampal neurons track positions of self, others, and gaze direction. However, it is unclear how their respective neural codes differ enough to avoid confusion while allowing for abstraction. We recorded from populations of hippocampal…

We studied the mutual information between a stimulus and a large system consisting of stochastic, statistically independent elements that respond to a stimulus. The Mutual Information (MI) of the system saturates exponentially with system…

Statistical Mechanics · Physics 2009-11-07 Kukjin Kang , Haim Sompolinsky

Advances in experimental neuroscience have transformed our ability to explore the structure and function of neural circuits. At the same time, advances in machine learning have unleashed the remarkable computational power of artificial…

Neurons and Cognition · Quantitative Biology 2021-11-23 SueYeon Chung , L. F. Abbott

We have developed an efficient information-maximization method for computing the optimal shapes of tuning curves of sensory neurons by optimizing the parameters of the underlying feedforward network model. When applied to the problem of…

Information Theory · Computer Science 2017-02-03 Wentao Huang , Xin Huang , Kechen Zhang

We propose a method that would allow for a rigorous statistical analysis of neural responses to natural stimuli, which are non-Gaussian and exhibit strong correlations. We have in mind a model in which neurons are selective for a small…

Biological Physics · Physics 2007-05-23 Tatyana Sharpee , Nicole C. Rust , William Bialek

Categorization is an important topic both for biological and artificial neural networks. Here, we take an information theoretic approach to assess the efficiency of the representations induced by category learning. We show that one can…

Machine Learning · Computer Science 2023-11-28 Laurent Bonnasse-Gahot , Jean-Pierre Nadal

Many tasks require mapping continuous input data (e.g. images) to discrete task outputs (e.g. class labels). Yet, how neural networks learn to perform such discrete computations on continuous data manifolds remains poorly understood. Here,…

Machine Learning · Computer Science 2025-12-02 Julian Brandon , Angus Chadwick , Arthur Pellegrino

Human cognition spans perception, memory, intuitive judgment, deliberative reasoning, action selection, and social inference, yet these capacities are often explained through distinct computational theories. Here we present a unified…

Artificial Intelligence · Computer Science 2026-01-01 Laha Ale

Image representations (artificial or biological) are often compared in terms of their global geometric structure; however, representations with similar global structure can have strikingly different local geometries. Here, we propose a…

Neurons and Cognition · Quantitative Biology 2025-05-19 Jenelle Feather , David Lipshutz , Sarah E. Harvey , Alex H. Williams , Eero P. Simoncelli
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