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Subgraph representation learning has been effective in solving various real-world problems. However, current graph neural networks (GNNs) produce suboptimal results for subgraph-level tasks due to their inability to capture complex…

Machine Learning · Computer Science 2025-11-12 Dongkwan Kim , Alice Oh

Graph neural networks are prominent models for representation learning over graph-structured data. While the capabilities and limitations of these models are well-understood for simple graphs, our understanding remains incomplete in the…

Machine Learning · Computer Science 2023-10-27 Xingyue Huang , Miguel Romero Orth , İsmail İlkan Ceylan , Pablo Barceló

Graphs with a simple spectrum admit cubic-time isomorphism testing, yet we prove that for every natural number $k$, the $k$-Weisfeiler-Leman ($k$-WL) test cannot distinguish all non-isomorphic graphs with a simple spectrum. As the WL…

Machine Learning · Computer Science 2026-05-25 Snir Hordan , Nadav Dym , Tim Seppelt

Graph Neural Networks (GNNs) have emerged as prominent models for representation learning on graph structured data. GNNs follow an approach of message passing analogous to 1-dimensional Weisfeiler Lehman (1-WL) test for graph isomorphism…

Machine Learning · Computer Science 2022-03-18 Mohammed Haroon Dupty , Wee Sun Lee

Graph neural networks (GNNs) have recently been adapted to temporal settings, often employing temporal versions of the message-passing mechanism known from GNNs. We divide temporal message passing mechanisms from literature into two main…

Machine Learning · Computer Science 2024-08-20 Przemysław Andrzej Wałęga , Michael Rawson

We precisely characterize the expressivity of computable Recurrent Graph Neural Networks (recurrent GNNs). We prove that recurrent GNNs with finite-precision parameters, sum aggregation, and ReLU activation, can compute any graph algorithm…

Machine Learning · Computer Science 2026-03-17 Eran Rosenbluth , Martin Grohe

The Weisfeiler-Leman (WL) dimension is an established measure for the inherent descriptive complexity of graphs and relational structures. It corresponds to the number of variables that are needed and sufficient to define the object of…

Discrete Mathematics · Computer Science 2024-02-06 Sandra Kiefer , Daniel Neuen

Our work is concerned with simplicial complexes that describe higher-order interactions in real complex systems. This description allows to go beyond the pairwise node-to-node representation that simple networks provide and to capture a…

Statistical Mechanics · Physics 2025-11-13 Sara Najem , Dima Mrad , Mohammad Elsayed

Various recent proposals increase the distinguishing power of Graph Neural Networks GNNs by propagating features between $k$-tuples of vertices. The distinguishing power of these "higher-order'' GNNs is known to be bounded by the…

Machine Learning · Computer Science 2021-06-15 Pablo Barceló , Floris Geerts , Juan Reutter , Maksimilian Ryschkov

Spatial networks are networks whose graph topology is constrained by their embedded spatial space. Understanding the coupled spatial-graph properties is crucial for extracting powerful representations from spatial networks. Therefore,…

Machine Learning · Computer Science 2024-01-11 Zheng Zhang , Sirui Li , Jingcheng Zhou , Junxiang Wang , Abhinav Angirekula , Allen Zhang , Liang Zhao

Given a graph $G$, the graph $[G]$ obtained by adding, for each pair of vertices of $G$, a unique vertex adjacent to both vertices is called the binding graph of $G$. In this work, we show that the class of binding graphs is…

Combinatorics · Mathematics 2024-08-27 Rui Xue

As it is well known, the isomorphism problem for vertex-colored graphs with color multiplicity at most 3 is solvable by the classical 2-dimensional Weisfeiler-Leman algorithm (2-WL). On the other hand, the prominent Cai-F\"urer-Immerman…

Computational Complexity · Computer Science 2020-03-18 Frank Fuhlbrück , Johannes Köbler , Oleg Verbitsky

Graph neural networks (GNNs) have been widely used in graph-related contexts. It is known that the separation power of GNNs is equivalent to that of the Weisfeiler-Lehman (WL) test; hence, GNNs are imperfect at identifying all…

Machine Learning · Computer Science 2025-02-07 Ziang Chen , Qiao Zhang , Runzhong Wang

Most existing works solving Room-to-Room VLN problem only utilize RGB images and do not consider local context around candidate views, which lack sufficient visual cues about surrounding environment. Moreover, natural language contains…

Computer Vision and Pattern Recognition · Computer Science 2023-10-03 Jingyang Huo , Qiang Sun , Boyan Jiang , Haitao Lin , Yanwei Fu

In recent studies, neural message passing has proved to be an effective way to design graph neural networks (GNNs), which have achieved state-of-the-art performance in many graph-based tasks. However, current neural-message passing…

Machine Learning · Computer Science 2021-04-21 Wentao Zhang , Yu Shen , Zheyu Lin , Yang Li , Xiaosen Li , Wen Ouyang , Yangyu Tao , Zhi Yang , Bin Cui

Generalized Lagrange-Weyl structures and compatible connections are introduced as a natural generalization of similar notions from Riemannian geometry. Exactly as in Riemannian case, the compatible connection is unique if certain symmetry…

Differential Geometry · Mathematics 2007-05-23 Mircea Crasmareanu

Accurate RNA secondary structure prediction is vital for understanding cellular regulation and disease mechanisms. Deep learning (DL) methods have surpassed traditional algorithms by predicting complex features like pseudoknots and…

Biomolecules · Quantitative Biology 2024-01-12 Frederic Runge , Jörg K. H. Franke , Daniel Fertmann , Frank Hutter

Simplicial complexes form an important class of topological spaces that are frequently used in many application areas such as computer-aided design, computer graphics, and simulation. Representation learning on graphs, which are just 1-d…

Machine Learning · Computer Science 2022-02-03 Mustafa Hajij , Ghada Zamzmi , Theodore Papamarkou , Vasileios Maroulas , Xuanting Cai

Twin-width is a graph parameter introduced in the context of first-order model checking, and has since become a central parameter in algorithmic graph theory. While many algorithmic problems become easier on arbitrary classes of bounded…

Combinatorics · Mathematics 2026-01-12 Irene Heinrich , Moritz Lichter , Klara Pakhomenko , Simon Raßmann

Rethink convolution-based graph neural networks (GNN) -- they characteristically suffer from limited expressiveness, over-smoothing, and over-squashing, and require specialized sparse kernels for efficient computation. Here, we design a…

Machine Learning · Computer Science 2024-10-01 Yuanqing Wang , Kyunghyun Cho
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