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Phylogenetic PCA (p-PCA) is a version of PCA for observations that are leaf nodes of a phylogenetic tree. P-PCA accounts for the fact that such observations are not independent, due to shared evolutionary history. The method works on…

Methodology · Statistics 2022-08-29 Morten Akhøj , Xavier Pennec , Stefan Sommer

The advent of high resolution imaging has made data on surface shape widespread. Methods for the analysis of shape based on landmarks are well established but high resolution data require a functional approach. The starting point is a…

Computer Vision and Pattern Recognition · Computer Science 2020-03-20 Stanislav Katina , Liberty Vittert , Adrian W. Bowman

This paper has two goals: to present some new results that are necessary for further study and applications of quasi-linear functionals, and, by combining known and new results, to serve as a convenient single source for anyone interested…

Functional Analysis · Mathematics 2019-02-12 Svetlana V. Butler

This paper provides theoretical and computational developments in statistical shape analysis of shape graphs, and demonstrates them using analysis of complex data from retinal blood-vessel (RBV) networks. The shape graphs are represented by…

Methodology · Statistics 2022-11-29 Aditi Basu Bal , Xiaoyang Guo , Tom Needham , Anuj Srivastava

Exploring the shape of point configurations has been a key driver in the evolution of TDA (short for topological data analysis) since its infancy. This survey illustrates the recent efforts to broaden these ideas to model spatial…

Computational Geometry · Computer Science 2024-06-07 Sebastiano Cultrera di Montesano , Ondrej Draganov , Herbert Edelsbrunner , Morteza Saghafian

The availability of affordable and portable depth sensors has made scanning objects and people simpler than ever. However, dealing with occlusions and missing parts is still a significant challenge. The problem of reconstructing a (possibly…

Computer Vision and Pattern Recognition · Computer Science 2018-04-05 Or Litany , Alex Bronstein , Michael Bronstein , Ameesh Makadia

Topological data analysis (TDA) is an active field of mathematics for quantifying shape in complex data. Standard methods in TDA such as persistent homology (PH) are typically focused on the analysis of data consisting of a single entity…

Density-equalizing map is a shape deformation technique originally developed for cartogram creation and sociological data visualization on planar geographical maps. In recent years, there has been an increasing interest in developing…

Graphics · Computer Science 2025-11-18 Shunyu Yao , Gary P. T. Choi

Knowledge of shape geometry plays a pivotal role in many shape analysis applications. In this paper we introduce a local geometry-inclusive global representation of 3D shapes based on computation of the shortest quasi-geodesic paths between…

Computer Vision and Pattern Recognition · Computer Science 2017-07-24 Somenath Das , Suchendra M. Bhandarkar

This paper introduces and demonstrates a computational pipeline for the statistical analysis of shape graph datasets, namely geometric networks embedded in 2D or 3D spaces. Unlike traditional abstract graphs, our purpose is not only to…

Machine Learning · Computer Science 2026-02-19 Murad Hossen , Demetrio Labate , Nicolas Charon

The past few years have seen a revived interest in quantum geometrical characterizations of band structures due to the rapid development of topological insulators and semi-metals. Although the metric tensor has been connected to many…

Mesoscale and Nanoscale Physics · Physics 2023-03-07 Adrien Bouhon , Abigail Timmel , Robert-Jan Slager

Recent developments in computer vision have enabled the availability of segmented images across various domains, such as medicine, where segmented radiography images play an important role in diagnosis-making. As prediction problems are…

Methodology · Statistics 2025-08-22 Issam-Ali Moindjié , Marie-Hélène Descary , Cédric Beaulac

Statistical shape modeling (SSM) is widely used in biology and medicine as a new generation of morphometric approaches for the quantitative analysis of anatomical shapes. Technological advancements of in vivo imaging have led to the…

We present a compressive beamforming method for coherent plane-wave compounding (CPWC) ultrasound imaging based on a far-field decomposition of the received radiofrequency (RF) data into virtual plane waves. This decomposition recasts the…

Signal Processing · Electrical Eng. & Systems 2026-03-25 Nikunj Khetan , Jerome Mertz

This paper presents a method for simultaneous optimization of the outer shape and internal topology of aircraft wings, with the objective of minimizing drag subject to lift and compliance constraints for multiple load cases. The physics are…

Computational Engineering, Finance, and Science · Computer Science 2023-05-01 Lukas C. Høghøj , Cian Conlan-Smith , Ole Sigmund , Casper Schousboe Andreasen

Contours may be viewed as the 2D outline of the image of an object. This type of data arises in medical imaging as well as in computer vision and can be modeled as data on a manifold and can be studied using statistical shape analysis.…

Applications · Statistics 2017-05-17 Chalani Prematilake , Leif Ellingson

Particle-based shape modeling (PSM) is a family of approaches that automatically quantifies shape variability across anatomical cohorts by positioning particles (pseudo landmarks) on shape surfaces in a consistent configuration. Recent…

Computer Vision and Pattern Recognition · Computer Science 2025-07-11 Hong Xu , Shireen Y. Elhabian

Protein folding -- the problem of predicting the spatial structure of a protein given its sequence of amino-acids -- has attracted considerable research effort in biochemistry in recent decades. In this work, we explore the potential of…

Quantum Physics · Physics 2022-04-06 Sami Boulebnane , Xavier Lucas , Agnes Meyder , Stanislaw Adaszewski , Ashley Montanaro

We propose to describe bulk wave functions of fractional quantum Hall states in terms of correlators of non-unitary b/c-spin systems. These yield a promising conformal field theory analogon of the composite fermion picture of Jain.…

Mesoscale and Nanoscale Physics · Physics 2009-11-07 Michael Flohr , Klaus Osterloh

Tube-like surfaces are widely encountered in geometry processing, engineering structures, and medical anatomy, yet their intrinsic longitudinal and circumferential topology is not well preserved by conventional planar annular or rectangular…

Graphics · Computer Science 2026-05-19 Shunyu Yao , Gary P. T. Choi