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Large language models (LLMs) have shown strong performance on clinical de-identification, the task of identifying sensitive identifiers to protect privacy. However, previous work has not examined their generalizability between formats,…

Computation and Language · Computer Science 2026-02-19 Noopur Zambare , Kiana Aghakasiri , Carissa Lin , Carrie Ye , J. Ross Mitchell , Mohamed Abdalla

Exploring the application of powerful large language models (LLMs) on the named entity recognition (NER) task has drawn much attention recently. This work pushes the performance boundary of zero-shot NER with LLMs by proposing a…

Computation and Language · Computer Science 2024-03-22 Tingyu Xie , Qi Li , Yan Zhang , Zuozhu Liu , Hongwei Wang

Small open-source language models are gaining attention for healthcare applications in low-resource settings where cloud infrastructure and GPU hardware may be unavailable. However, the reliability of these models under different phrasings…

Computation and Language · Computer Science 2026-03-18 Shravani Hariprasad

Efficient multimodal large language models (EMLLMs), in contrast to multimodal large language models (MLLMs), reduce model size and computational costs and are often deployed on resource-constrained devices. However, due to data privacy…

Pretrained language models (PLMs) have shown remarkable few-shot learning capabilities when provided with properly formatted examples. However, selecting the "best" examples remains an open challenge. We propose a complexity-based prompt…

Computation and Language · Computer Science 2024-08-01 Rishabh Adiga , Lakshminarayanan Subramanian , Varun Chandrasekaran

Extracting patient information from unstructured text is a critical task in health decision-support and clinical research. Large language models (LLMs) have shown the potential to accelerate clinical curation via few-shot in-context…

Computation and Language · Computer Science 2023-06-21 Zelalem Gero , Chandan Singh , Hao Cheng , Tristan Naumann , Michel Galley , Jianfeng Gao , Hoifung Poon

To enhance the performance of large language models (LLMs) in biomedical natural language processing (BioNLP) by introducing a domain-specific instruction dataset and examining its impact when combined with multi-task learning principles.…

Computation and Language · Computer Science 2024-06-10 Hieu Tran , Zhichao Yang , Zonghai Yao , Hong Yu

Large language models used for clinical abstraction are sensitive to prompt wording, yet most work treats prompts as fixed and studies uncertainty in isolation. We argue these should be treated jointly. Across two clinical tasks (MedAlign…

Computation and Language · Computer Science 2026-02-02 Arinbjörn Kolbeinsson , Daniel Timbie , Sajjan Narsinghani , Sanjay Hariharan

Recently, Large Language Models (LLMs) have demonstrated significant potential for data annotation, markedly reducing the labor costs associated with downstream applications. However, existing methods mostly adopt an aggressive strategy by…

Machine Learning · Computer Science 2025-06-05 Mingxuan Xia , Haobo Wang , Yixuan Li , Zewei Yu , Jindong Wang , Junbo Zhao , Runze Wu

Medical image analysis using deep learning is often challenged by limited labeled data and high annotation costs. Fine-tuning the entire network in label-limited scenarios can lead to overfitting and suboptimal performance. Recently, prompt…

Computer Vision and Pattern Recognition · Computer Science 2023-08-10 Fan Bai , Ke Yan , Xiaoyu Bai , Xinyu Mao , Xiaoli Yin , Jingren Zhou , Yu Shi , Le Lu , Max Q. -H. Meng

Understanding how individuals with Parkinson's disease (PD) describe cognitive experiences in their daily lives can offer valuable insights into disease-related cognitive and emotional changes. However, extracting such information from…

Computation and Language · Computer Science 2025-11-13 Varada Khanna , Nilay Bhatt , Ikgyu Shin , Sule Tinaz , Yang Ren , Hua Xu , Vipina K. Keloth

Small language models (SLMs) enable low-cost, private, on-device inference, but they often fail on problems that require specialized domain knowledge or multi-step reasoning. Existing approaches for improving reasoning either rely on scale…

Computation and Language · Computer Science 2026-01-08 Kenan Alkiek , David Jurgens , Vinod Vydiswaran

Prompt-based fine-tuning has become an essential method for eliciting information encoded in pre-trained language models for a variety of tasks, including text classification. For multi-class classification tasks, prompt-based fine-tuning…

Computation and Language · Computer Science 2024-10-04 Zhiwen You , Kanyao Han , Haotian Zhu , Bertram Ludäscher , Jana Diesner

Fine-tuning pre-trained language models (PLMs), e.g., SciBERT, generally requires large numbers of annotated data to achieve state-of-the-art performance on a range of NLP tasks in the scientific domain. However, obtaining the fine-tune…

Computation and Language · Computer Science 2025-12-30 Jiawei Liu , Zi Xiong , Yi Jiang , Yongqiang Ma , Wei Lu , Yong Huang , Qikai Cheng

Chronic dermatologic diseases such as pemphigus require long-term follow-up, generating extensive longitudinal clinical documentation that is difficult to review comprehensively during routine visits and increasing clinician workload as…

Large Language Models (LLMs) demonstrate remarkable versatility in various NLP tasks but encounter distinct challenges in biomedical due to the complexities of language and data scarcity. This paper investigates LLMs application in the…

Computation and Language · Computer Science 2024-07-12 Masoud Monajatipoor , Jiaxin Yang , Joel Stremmel , Melika Emami , Fazlolah Mohaghegh , Mozhdeh Rouhsedaghat , Kai-Wei Chang

Developers use logging statements to create logs that document system behavior and aid in software maintenance. As such, high-quality logging is essential for effective maintenance; however, manual logging often leads to errors and…

Software Engineering · Computer Science 2025-09-05 Renyi Zhong , Yichen Li , Guangba Yu , Wenwei Gu , Jinxi Kuang , Yintong Huo , Michael R. Lyu

The MEDIQA-CORR 2024 shared task aims to assess the ability of Large Language Models (LLMs) to identify and correct medical errors in clinical notes. In this study, we evaluate the capability of general LLMs, specifically GPT-3.5 and GPT-4,…

Computation and Language · Computer Science 2024-05-29 Aryo Pradipta Gema , Chaeeun Lee , Pasquale Minervini , Luke Daines , T. Ian Simpson , Beatrice Alex

Pre-trained Language Models (PLMs) have been applied in NLP tasks and achieve promising results. Nevertheless, the fine-tuning procedure needs labeled data of the target domain, making it difficult to learn in low-resource and non-trivial…

Computation and Language · Computer Science 2022-11-08 Dongfang Li , Baotian Hu , Qingcai Chen

Various deep learning algorithms have been developed to analyze different types of clinical data including clinical text classification and extracting information from 'free text' and so on. However, automate the keyword extraction from the…

Computation and Language · Computer Science 2019-10-25 Matthew Tang , Priyanka Gandhi , Md Ahsanul Kabir , Christopher Zou , Jordyn Blakey , Xiao Luo