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Exchange of molecules allows cells to exchange information. How robust is the information to changes in cell parameters? We use a mapping between the stochastic dynamics of two cells sharing a stimulatory molecule, and parameters akin to an…

Biological Physics · Physics 2024-07-10 Ismail Qunbar , Michael Vennettilli , Amir Erez

We review the mathematical formalism underlying the modelling of stochasticity in biological systems. Beginning with a description of the system in terms of its basic constituents, we derive the mesoscopic equations governing the dynamics…

Populations and Evolution · Quantitative Biology 2012-11-05 Alan J. McKane , Tommaso Biancalani , Tim Rogers

Motile eukaryotic cells display distinct modes of migration that often occur within the same cell type. It remains unclear, however, whether transitions between the migratory modes require changes in external conditions, or whether the…

Pattern Formation and Solitons · Physics 2025-05-29 Jack M. Hughes , Cristina Martinez-Torres , Carsten Beta , Leah Edelstein-Keshet , Arik Yochelis

Noise and spatial degrees of freedom characterize most ecosystems. Some aspects of their influence on the coevolution of populations with cyclic interspecies competition have been demonstrated in recent experiments [e.g. B. Kerr et al.,…

Populations and Evolution · Quantitative Biology 2007-12-08 Tobias Reichenbach , Mauro Mobilia , Erwin Frey

We explore the joint effect of the intrinsic noise and time delay on the spatial pattern formation within a multi-scale mobile lattice model of the epithelium. The protein fluctuations are driven by transcription/translation processes in…

Adaptation and Self-Organizing Systems · Physics 2015-06-12 Dmitry Bratsun , Andrey Zakharov

A spatial stochastic model is developed which describes the 3D nanomorphology of composite materials, being blends of two different (organic and inorganic) solid phases. Such materials are used, for example, in photoactive layers of hybrid…

Condensation in cumulus clouds plays a key role in structuring the mean, non-precipitating trade-wind boundary layer. Here, we summarise how this role also explains the spontaneous growth of mesoscale ($>O(10)$ km) fluctuations in clouds…

This paper studies nonstationary open dynamical systems from the statistical viewpoint. By open, we mean that trajectories may escape through holes in the phase space. By nonstationary, we mean that the dynamical model itself (as well as…

Dynamical Systems · Mathematics 2020-05-19 Brett Geiger , William Ott

The initial time-dependence of a state in circumstances where it makes transitions to, or decay to, a second state has been investigated. In classical stochastic processes, the observed time dependence of transition or decay proportional to…

High Energy Physics - Phenomenology · Physics 2023-03-15 Maciej Rybczyński , Zbigniew Włodarczyk

We study the effects of propagation delays on the stochastic dynamics of bumps in neural fields with multiple layers. In the absence of noise, each layer supports a stationary bump. Using linear stability analysis, we show that delayed…

Neurons and Cognition · Quantitative Biology 2015-06-23 Zachary P. Kilpatrick

Clouds are important components of the atmosphere. Since it is usually not possible to treat them as ensembles of huge numbers of particles, parameterizations on the basis of averaged quantities (mass and/or number concentration) must be…

Atmospheric and Oceanic Physics · Physics 2018-11-29 Juliane Rosemeier , Manuel Baumgartner , Peter Spichtinger

Bistable autonomous systems can be found inmany areas of science. When the intrinsic noise intensity is large, these systems exhibits stochastic transitions from onemetastable steady state to another. In electronic bistable memories, these…

Statistical Mechanics · Physics 2024-05-14 Léopold Van Brandt , Jean-Charles Delvenne

Local-box hydrodynamical model atmospheres provide statistical information about the spatial dependence, as well as temporal evolution, of a star's emergent radiation field. Here, we consider late-type stellar atmospheres for which temporal…

Astrophysics · Physics 2009-11-11 Hans-G. Ludwig

The Earth is well-known to be, in the current astronomical configuration, in a regime where two asymptotic states can be realised. The warm state we live in is in competition with the ice-covered snowball state. The bistability exists as a…

Atmospheric and Oceanic Physics · Physics 2019-04-24 Valerio Lucarini , Tamas Bodai

Stochastic storage models based on essentially non-Gaussian noise are considered. The stochastic description of physical systems based on stochastic storage models is associated with generalized Poisson (or shot) noise, in which the jump…

Statistical Mechanics · Physics 2025-09-22 V. V. Ryazanov

We investigate the connection between the transport properties and the thermodynamics of electronic systems with a tendency to form broken-symmetry mesophases evocative of the physics of liquid crystals. Through a hydrodynamic approach to…

Strongly Correlated Electrons · Physics 2009-11-13 Rafael M. Fernandes , Jörg Schmalian , Harry Westfahl

Tracking of individual particle and studying their motion serves as a direct means to understand the dynamics in crowded and complex environments. In this study, the dynamics of tracer particles in the matrix of dense soft-colloidal…

Soft Condensed Matter · Physics 2023-06-28 Jimpaul Samukcham , Lenin S. Shagolsem

The effect caused by the presence of a number of distinct time scales in a simple stochastic model for the Earth's atmosphere temperature fluctuations is studied. The model is described by a dissipative dynamics consisting of a set of…

Atmospheric and Oceanic Physics · Physics 2007-05-23 Arturo Berrones

Topological phases support edge states that can be robust to material deformations and other perturbations. While well-studied in quantum systems, topological phases have also been observed in stochastic and biochemical systems, yet it…

Statistical Mechanics · Physics 2026-04-06 Ziyin Xiong , Aleksandra Nelson , Evelyn Tang

Athermal systems across a large range of length scales, ranging from foams and granular bead packings to crumpled metallic sheets, exhibit slow stress relaxation when compressed. Experimentally they show a non-monotonic stress response when…

Soft Condensed Matter · Physics 2021-12-07 Rituparno Mandal , Diego Tapias , Peter Sollich
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