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Microscopic models of reaction-diffusion processes on the cell membrane can link local spatiotemporal effects to macroscopic self-organized patterns often observed on the membrane. Simulation schemes based on the microscopic lattice method…

Subcellular Processes · Quantitative Biology 2019-04-24 Wei-Xiang Chew , Kazunari Kaizu , Masaki Watabe , Sithi V. Muniandy , Koichi Takahashi , Satya N. V. Arjunan

The unbiased thermal diffusion of an overdamped Brownian particle in a square lattice potential is considered in the presence of an externally applied ac driving. The resulting diffusion matrix exhibits two orthogonal eigenvectors with…

Statistical Mechanics · Physics 2012-03-22 David Speer , Ralf Eichhorn , Peter Reimann

We consider a finite system of hard spheres that collide inelastically according to a particular model, losing a fixed amount of kinetic energy at each collision. We develop the theory of the Transport-Collision-Transport (TCT) dynamics,…

Mathematical Physics · Physics 2025-01-16 Théophile Dolmaire , Juan J. L. Velázquez

The diffusive motion of colloidal particles dispersed in a premelting solid is analyzed within the framework of irreversible thermodynamics. We determine the mass diffusion coefficient, thermal diffusion coefficient and Soret coefficient of…

Soft Condensed Matter · Physics 2009-11-13 S. S. L. Peppin , M. Spannuth , J. S. Wettlaufer

We consider viscous, heat conducting mixtures of molecularly miscible chemical species forming a fluid in which the constituents can undergo chemical reactions. Assuming a common temperature for all components, we derive a closed system of…

Fluid Dynamics · Physics 2016-04-01 Dieter Bothe , Wolfgang Dreyer

Reaction-diffusion processes are the foundational model for a diverse range of complex systems, ranging from biochemical reactions to social agent-based phenomena. The underlying dynamics of these systems occur at the individual…

Statistical Mechanics · Physics 2025-10-15 Mauricio J. del Razo , Margarita Kostré

Understanding the transport behavior of quantum many-body systems constitutes an important physical endeavor, both experimentally and theoretically. While a reliable classification into normal and anomalous dynamics is known to be…

Statistical Mechanics · Physics 2025-06-11 Jiaozi Wang , Mats H. Lamann , Robin Steinigeweg , Jochen Gemmer

An accurate and easily extendable method to deal with lattice dynamics of solids is offered. It is based on first-principles molecular dynamics simulations and provides a consistent way to extract the best possible harmonic - or higher…

Materials Science · Physics 2013-10-14 Olle Hellman , I. A. Abrikosov , S. I. Simak

A variety of enhanced statistical and numerical methods are now routinely used to extract comprehensible and relevant thermodynamic information from the vast amount of complex, high-dimensional data obtained from intensive molecular…

Soft Condensed Matter · Physics 2020-10-14 Francois Sicard , Vladimir Koskin , Alessia Annibale , Edina Rosta

The kinetics of the deposition of colloidal particles onto a solid surface is analytically studied. We take into account both the diffusion of particles from the bulk as well as the geometrical aspects of the layer of adsorbed particles. We…

Statistical Mechanics · Physics 2009-10-30 P. Wojtaszczyk , J. B. Avalos , J. M. Rubi

We present a general phase-space kinetic model for charged particle transport through combined localised and delocalised states, capable of describing scattering collisions, trapping, detrapping and losses. The model is described by a…

Statistical Mechanics · Physics 2016-09-14 Peter W. Stokes , Bronson Philippa , Daniel Cocks , Ronald D. White

The Markovian diffusion theory is generalized within the framework of the special theory of relativity using a modification of the mathematical calculus of diffusion on Riemannian manifolds (with definite metric) to describe diffusion on…

Mathematical Physics · Physics 2013-05-29 Joachim Herrmann

Heat exchangers incorporating triply periodic minimal surface (TPMS) lattice structures have attracted considerable research interest because they promote uniform flow distribution, disrupt boundary layers, and improve convective…

Computational Physics · Physics 2025-12-12 Kazutaka Yanagihara , Jun Iwasaki , Kiyoto Saso , Taichi Yamashita , Shomu Murakoshi , Akihiro Takezawa

This work derives the Navier--Stokes hydrodynamic equations for a model of a confined, quasi-two-dimensional, $s$-component mixture of inelastic, smooth, hard spheres. Using the inelastic version of the revised Enskog theory, macroscopic…

Soft Condensed Matter · Physics 2026-03-27 David González Méndez , Vicente Garzó

We review some exact results for the motion of a tagged particle in simple models. Then, we study the density dependence of the self diffusion coefficient, $D_N(\rho)$, in lattice systems with simple symmetric exclusion in which the…

Statistical Mechanics · Physics 2015-06-25 A. Asselah , R. Brito , J. L. Lebowitz

We present a simple mechanical model for dynamic wetting phenomena. Metallic balls spread along a periodically corrugated surface simulating molecules of liquid advancing along a solid substrate. A vertical stack of balls mimics a liquid…

Condensed Matter · Physics 2009-10-28 S. F. Burlatsky , J. G. Berberian , J. Shore , W. P. Reinhardt

We propose a simple model of coupled heat and particle transport based on a zero-dimensional classical deterministic dynamics which is reminiscent of a railway switch whose action is only a function of the particle's energy. It is shown…

Mesoscale and Nanoscale Physics · Physics 2012-11-28 Martin Horvat , Tomaz Prosen , Giuliano Benenti , Giulio Casati

Using methods of kinetic theory and liquid state theory we propose a description of the non-equilibrium behavior of molecular fluids which takes into account their microscopic structure and thermodynamic properties. The present work…

Statistical Mechanics · Physics 2009-02-24 Umberto Marini Bettolo Marconi , Simone Melchionna

We study the broadening of initially localized wave packets in a quasi one-dimensional diamond ladder with interacting, spinless fermions. The lattice possesses a flat band causing localization. We place special focus on the transition away…

Statistical Mechanics · Physics 2024-06-04 Mirko Daumann , Thomas Dahm

We propose the generalization of the thin film equation (TFE) to arbitrarily many immiscible liquid layers. Then, we provide different pathways for deriving the hydrodynamic pressure within the individual layers, showing how to understand…

Fluid Dynamics · Physics 2024-09-26 Tilman Richter , Paolo Malgaretti , Jens Harting
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