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Transformer-based large language models are rapidly advancing in the field of machine learning research, with applications spanning natural language, biology, chemistry, and computer programming. Extreme scaling and reinforcement learning…

Chemical Physics · Physics 2023-04-12 Daniil A. Boiko , Robert MacKnight , Gabe Gomes

We present \textbf{Deep Researcher Agent}, an open-source framework that enables large language model (LLM) agents to autonomously conduct deep learning experiments around the clock. Unlike existing AI research assistants that focus on…

Artificial Intelligence · Computer Science 2026-04-08 Xiangyue Zhang

Deep Research Agents (DRAs) aim to answer complex questions by searching the web, checking evidence, and synthesizing conclusions across heterogeneous sources. We introduce a category-theoretic framework for evaluating and improving such…

Machine Learning · Computer Science 2026-04-30 Shuoling Liu , Zhiquan Tan , Kun Yi , Hui Wu , Yihan Li , Jiangpeng Yan , Liyuan Chen , Kai Chen , Qiang Yang

Agentic systems have recently emerged as a promising tool to automate literature-based ideation. However, current systems often remain black-box, with limited transparency or control for researchers. Our work introduces TrustResearcher, a…

Multiagent Systems · Computer Science 2026-01-27 Jiawei Zhou , Ruicheng Zhu , Mengshi Chen , Jianwei Wang , Kai Wang

Agents based on large language models have shown great potential in accelerating scientific discovery by leveraging their rich background knowledge and reasoning capabilities. In this paper, we introduce BioDiscoveryAgent, an agent that…

Artificial Intelligence · Computer Science 2025-03-11 Yusuf Roohani , Andrew Lee , Qian Huang , Jian Vora , Zachary Steinhart , Kexin Huang , Alexander Marson , Percy Liang , Jure Leskovec

The rapid growth of AI for Science (AI4S) has underscored the significance of scientific datasets, leading to the establishment of numerous national scientific data centers and sharing platforms. Despite this progress, efficiently promoting…

Information Retrieval · Computer Science 2026-01-06 Qingqing Long , Haotian Chen , Chenyang Zhao , Xiaolei Du , Xuezhi Wang , Pengyao Wang , Chengzan Li , Yuanchun Zhou , Hengshu Zhu

Tool-integrated reasoning has emerged as a key focus for enabling agentic applications. Among these, DeepResearch Agents have gained significant attention for their strong performance on complex, open-ended information-seeking tasks. We…

Artificial Intelligence · Computer Science 2025-09-30 Shreyas Singh , Kunal Singh , Pradeep Moturi

Scientific reasoning is critical for developing AI scientists and supporting human researchers in advancing the frontiers of natural science discovery. However, the open-source community has primarily focused on mathematics and coding while…

Computation and Language · Computer Science 2025-08-28 Run-Ze Fan , Zengzhi Wang , Pengfei Liu

Deep Research (DR) is an emerging agent application that leverages large language models (LLMs) to address open-ended queries. It requires the integration of several capabilities, including multi-step reasoning, cross-document synthesis,…

The field of AI research is advancing at an unprecedented pace, enabling automated hypothesis generation and experimental design across diverse domains such as biology, mathematics, and artificial intelligence. Despite these advancements,…

Machine Learning · Computer Science 2025-10-07 Yaowenqi Liu , Bingxu Meng , Rui Pan , Yuxing Liu , Jerry Huang , Jiaxuan You , Tong Zhang

Early artificial intelligence paradigms exhibited separated cognitive functions: Neural Networks focused on "perception-representation," Reinforcement Learning on "decision-making-behavior," and Symbolic AI on "knowledge-reasoning." With…

Artificial Intelligence · Computer Science 2026-01-07 Zhi Liu , Guangzhi Wang

As LLMs shift toward autonomous agents, Deep Research has emerged as a pivotal metric. However, existing academic benchmarks like BrowseComp often fail to meet real-world demands for open-ended research, which requires robust skills in…

The frontier of mathematics is defined by problems whose solutions are not yet known, yet it remains unclear whether language models can meaningfully engage with such problems without human intervention. A major obstacle is the lack of…

Computation and Language · Computer Science 2026-05-28 Guijin Son , Seungyeop Yi , Minju Gwak , Hyunwoo Ko , Wongi Jang , Youngjae Yu

The process of scientific discovery relies on an interplay of observations, analysis, and hypothesis generation. Machine learning is increasingly being adopted to address individual aspects of this process. However, it remains an open…

Artificial Intelligence · Computer Science 2026-05-26 Maximilian Nägele , Florian Marquardt

General AI Agents are increasingly recognized as foundational frameworks for the next generation of artificial intelligence, enabling complex reasoning, web interaction, coding, and autonomous research capabilities. However, current agent…

Deep research agents increasingly interleave web browsing with multi-step computation, yet existing benchmarks evaluate these capabilities in isolation, creating a blind spot in assessing real-world performance. We introduce DRBENCHER, a…

Artificial Intelligence · Computer Science 2026-04-24 Young-Suk Lee , Ramon Fernandez Astudillo , Radu Florian

Deep search capabilities have become an indispensable competency for frontier Large Language Model (LLM) agents, yet their development remains dominated by industrial giants. The typical industry recipe involves a highly resource-intensive…

Artificial Intelligence · Computer Science 2026-05-06 Yuwen Du , Rui Ye , Shuo Tang , Keduan Huang , Xinyu Zhu , Yuzhu Cai , Siheng Chen

The pace of scientific research, vital for improving human life, is complex, slow, and needs specialized expertise. Meanwhile, novel, impactful research often stems from both a deep understanding of prior work, and a cross-pollination of…

Computation and Language · Computer Science 2025-02-11 Jinheon Baek , Sujay Kumar Jauhar , Silviu Cucerzan , Sung Ju Hwang

Generating deep research reports requires large-scale information acquisition and the synthesis of insight-driven analysis, posing a significant challenge for current language models. Most existing approaches follow a plan-then-write…

Trustworthiness and transparency are essential for the clinical adoption of artificial intelligence (AI) in healthcare and biomedical research. Recent deep research systems aim to accelerate evidence-grounded scientific discovery by…

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