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Neuronal avalanches, measured in vitro and in vivo, exhibit a robust critical behaviour. Their temporal organization hides the presence of correlations. Here we present experimental measurements of the waiting time distribution between…

Neurons and Cognition · Quantitative Biology 2012-04-30 F. Lombardi , H. J. Herrmann , C. Perrone-Capano , D. Plenz , L. de Arcangelis

We considered a model for an infectious disease outbreak, when the depletion of susceptible individuals is negligible, and assumed that individuals adapt their behavior according to the information they receive about new cases. In line with…

Populations and Evolution · Quantitative Biology 2025-11-27 Alessia andò , Simone De Reggi , Francesca Scarabel , Rossana Vermiglio , Jianhong Wu

Coherent oscillatory activity can arise spontaneously as a result of increased coupling in a system of excitable and passive cells, each being quiescent in isolation. This can potentially explain the appearance of spontaneous rhythmic…

Disordered Systems and Neural Networks · Physics 2012-12-17 Jinshan Xu , Rajeev Singh , Nicolas Garnier , Sitabhra Sinha , Alain Pumir

We propose a minimal model to simulate long waiting times followed by evolutionary bursts on rugged landscapes. It combines point and inversions-like mutations as sources of genetic variation. The inversions are intended to simulate one of…

Populations and Evolution · Quantitative Biology 2021-05-13 Leonardo Trujillo , Paul Banse , Guillaume Beslon

The three-dimensional (3D) Fitzhugh-Nagumo neuron model with inertia was shown to exhibit a chaotic mixed-mode dynamics composed of large-amplitude spikes separated by an irregular number of small-amplitude chaotic oscillations. In contrast…

Adaptation and Self-Organizing Systems · Physics 2023-01-25 Marzena Ciszak , Salvador Balle , Oreste Piro , Francesco Marino

Learning is based on synaptic plasticity, which affects and is driven by neural activity. Because pre- and postsynaptic spiking activity is shaped by randomness, the synaptic weights follow a stochastic process, requiring a probabilistic…

Neurons and Cognition · Quantitative Biology 2026-01-14 Jakob Stubenrauch , Naomi Auer , Richard Kempter , Benjamin Lindner

We consider a model of a square-wave bursting neuron residing in the regime of tonic spiking. Upon introduction of small stochastic forcing, the model generates irregular bursting. The statistical properties of the emergent bursting…

Adaptation and Self-Organizing Systems · Physics 2008-11-11 Pawel Hitczenko , Georgi S. Medvedev

Exploiting previous results on Markovian dynamics and fluctuation theorems, we study the consequences of memory effects on single realizations of nonequilibrium processes within an open system approach. The entropy production along single…

Statistical Mechanics · Physics 2015-06-12 Bruno Leggio , Anna Napoli , Heinz-Peter Breuer , Antonino Messina

Unlike macroscopic engines, the molecular machinery of living cells is strongly affected by fluctuations. Stochastic Thermodynamics uses Markovian jump processes to model the random transitions between the chemical and configurational…

Statistical Mechanics · Physics 2015-10-19 Bernhard Altaner , Artur Wachtel , Jürgen Vollmer

In this work, we investigate entropy solutions for a class of systems of nonlocal {balance laws in which the convective flux and the source involves terms where the state variable convolved with kernels} in both spatial and temporal…

Analysis of PDEs · Mathematics 2026-05-05 Aekta Aggarwal , N. K. Aswini , Sarvesh Kumar , Ganesh Vaidya

One of the main challenges in the study of time-varying networks is the interplay of memory effects with structural heterogeneity. In particular, different nodes and dyads can have very different statistical properties in terms of both link…

Physics and Society · Physics 2026-04-20 Giulio Virginio Clemente , Claudio J. Tessone , Diego Garlaschelli

Cortical networks can maintain memories for decades despite the short lifetime of synaptic strength. Can a neural network store long-lasting memories in unstable synapses? Here, we study the effects of random noise on the stability of…

Neurons and Cognition · Quantitative Biology 2012-06-01 Yi Wei , Alexei A. Koulakov

Neural-network quantum states (NQS) have been shown to be a suitable variational ansatz to simulate out-of-equilibrium dynamics in two-dimensional systems using time-dependent variational Monte Carlo (t-VMC). In particular, stable and…

Strongly Correlated Electrons · Physics 2022-05-18 Damian Hofmann , Giammarco Fabiani , Johan H. Mentink , Giuseppe Carleo , Michael A. Sentef

There are a large variety of hybrid stochastic systems that couple a continuous process with some form of stochastic switching mechanism. In many cases the system switches between different discrete internal states according to a…

Statistical Mechanics · Physics 2023-11-01 Paul C Bressloff

The effect of stochasticity, in the form of Gaussian white noise, in a predator-prey model with two distinct time-scales is presented. A supercritical singular Hopf bifurcation yields a Type II excitability in the deterministic model. We…

Dynamical Systems · Mathematics 2017-07-20 Susmita Sadhu

Regime shifts in biology, ecology, and other complex systems are often interpreted through stability landscapes and early warning signals that implicitly assume dynamics without memory effects. Yet many real systems exhibit these effects,…

Dynamical Systems · Mathematics 2026-02-25 Moein Khalighi , Chandler Ross , Ville Laitinen , Guilhem Sommeria-Klein , Leo Lahti

Non-reciprocal couplings are frequently found in systems out-of-equilibrium such as neuronal networks. We consider generalized Kuramoto models with non-reciprocal adaptive couplings. The non-reciprocity refers to the type of couplings…

Adaptation and Self-Organizing Systems · Physics 2026-02-24 Sayantan Nag Chowdhury , Hildegard Meyer-Ortmanns

Perturbing a system far away from equilibrium via a time dependent protocol can formally be described by a nonlinear Volterra series expansion. Here we derive identities for the nonlinear memory kernels arising in such nonlinear expansion,…

Statistical Mechanics · Physics 2025-02-17 Juliana Caspers , Matthias Krüger

A general class of stochastic gene expression models with self regulation is considered. One or more genes randomly switch between regulatory states, each having a different mRNA transcription rate. The gene or genes are self regulating…

Molecular Networks · Quantitative Biology 2014-12-30 Jay Newby

Proper management of resources whose arrival and consumption are subject to environmental randomness is an intrinsic process in both natural and artificial systems. This phenomenon can be modeled as a queuing process whose arrival…

Statistical Mechanics · Physics 2026-05-18 José Giral-Barajas , Paul C. Bressloff