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Machine learning interatomic potentials (MLIPs) have substantially advanced atomistic simulations in materials science and chemistry by balancing accuracy and computational efficiency. While leading MLIPs rely on representing atomic…

Materials Science · Physics 2025-05-05 Mingjian Wen , Wei-Fan Huang , Jin Dai , Santosh Adhikari

This paper studies the problem of post-hoc calibration of machine learning classifiers. We introduce the following desiderata for uncertainty calibration: (a) accuracy-preserving, (b) data-efficient, and (c) high expressive power. We show…

Machine Learning · Computer Science 2020-07-01 Jize Zhang , Bhavya Kailkhura , T. Yong-Jin Han

Large-scale atomistic simulations are essential to bridge computational materials and chemistry to realistic materials and drug discovery applications. In the past few years, rapid developments of machine learning interatomic potentials…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-02-03 Kevin Han , Bowen Deng , Amir Barati Farimani , Gerbrand Ceder

We systematically investigate multi-token prediction (MTP) capabilities within LLMs pre-trained for next-token prediction (NTP). We first show that such models inherently possess MTP capabilities via numerical marginalization over…

Computation and Language · Computer Science 2025-02-14 Somesh Mehra , Javier Alonso Garcia , Lukas Mauch

Free energy profiles serve as a fundamental bridge between microscopic atomic fluctuations and macroscopic thermodynamic observables. Estimating the free energy profile along a reaction coordinate, referred to as the potential of mean force…

Probing in mixed-integer programming (MIP) is a technique of temporarily fixing variables to discover implications that are useful to branch-and-cut solvers. Such fixing is typically performed one variable at a time -- this paper develops…

Optimization and Control · Mathematics 2025-11-11 Yongzheng Dai , Chen Chen

A machine-learned interatomic potential (MLIP) for multilayer MoS2 was developed using the ultra-fast force field (UF3) framework. The UF3 MLIP reproduces key properties in strong agreement with DFT including lattice constants, interlayer…

Materials Science · Physics 2026-05-20 Emir Bilgili , Nicholas Taormina , Richard Hennig , Simon R. Phillpot , Youping Chen

We propose a physics-informed machine learning method for uncertainty quantification in high-dimensional inverse problems. In this method, the states and parameters of partial differential equations (PDEs) are approximated with truncated…

Machine Learning · Computer Science 2023-12-27 Yifei Zong , David Barajas-Solano , Alexandre M. Tartakovsky

Investigating Li$^+$ transport within the amorphous lithium phosphorous oxynitride (LiPON) framework, especially across a Li||LiPON interface, has proven challenging due to its amorphous nature and varying stoichiometry, necessitating large…

Materials Science · Physics 2025-04-03 Aqshat Seth , Rutvij Pankaj Kulkarni , Gopalakrishnan Sai Gautam

Machine Learning Inter-atomic Potentials (MLIPs) have become a common tool in use by computational chemists due to their combination of accuracy and speed. Yet, it is still not clear how well these tools behave at or near transitions states…

Chemical Physics · Physics 2022-11-15 Aaron Philip , Guoqing Zhou , Benjamin Nebgen

This paper explores the intricate relationship between interpretability and robustness in deep learning models. Despite their remarkable performance across various tasks, deep learning models often exhibit critical vulnerabilities,…

Machine Learning · Computer Science 2024-12-30 Navid Nayyem , Abdullah Rakin , Longwei Wang

Artificial intelligence techniques have achieved strong performance in classifying Windows Portable Executable (PE) malware, but their reliability often degrades under dataset shifts, leading to misclassifications with severe security…

Cryptography and Security · Computer Science 2025-12-23 Rahul Yumlembam , Biju Issac , Seibu Mary Jacob

Machine-learned interatomic potentials (MLIPs) have become the gold standard for atomistic simulations, yet their extension to magnetic materials remains challenging because spin fluctuations must be captured either explicitly or…

Materials Science · Physics 2025-07-28 E. O. Khazieva , N. M. Chtchelkatchev , R. E. Ryltsev

Machine learning interatomic potentials (MLIPs) have proven to be wildly useful for molecular dynamics simulations, powering countless drug and materials discovery applications. However, MLIPs face two primary bottlenecks preventing them…

Machine Learning · Computer Science 2026-01-30 Kevin Han , Haolin Cong , Bowen Deng , Amir Barati Farimani

Machine-learning interatomic potentials (MLIPs) have greatly extended the reach of atomic-scale simulations, offering the accuracy of first-principles calculations at a fraction of the cost. Leveraging large quantum mechanical databases and…

Despite extensive research on neural network calibration, existing methods typically apply global transformations that treat all predictions uniformly, overlooking the heterogeneous reliability of individual predictions. Furthermore, the…

Machine Learning · Computer Science 2025-10-22 Hassan Gharoun , Mohammad Sadegh Khorshidi , Kasra Ranjbarigderi , Fang Chen , Amir H. Gandomi

Remote sensing scene classification has been extensively studied for its critical roles in geological survey, oil exploration, traffic management, earthquake prediction, wildfire monitoring, and intelligence monitoring. In the past, the…

Computer Vision and Pattern Recognition · Computer Science 2023-03-27 Liya Wang , Alex Tien

We investigate the problem of autonomous object classification and semantic SLAM, which in general exhibits a tight coupling between classification, metric SLAM and planning under uncertainty. We contribute a unified framework for inference…

Robotics · Computer Science 2021-05-27 Vladimir Tchuiev , Vadim Indelman

In this paper, we explore model-based approach to training robust and interpretable binarized regression models for multiclass classification tasks using Mixed-Integer Programming (MIP). Our MIP model balances the optimization of prediction…

Machine Learning · Computer Science 2022-03-22 Sanjana Tule , Nhi Ha Lan Le , Buser Say

Pre-trained Language Models (PLMs) are trained on large amounts of unlabeled data, yet they exhibit remarkable reasoning skills. However, the trustworthiness challenges posed by these black-box models have become increasingly evident in…

Computation and Language · Computer Science 2025-08-26 Yunxiao Zhao , Hao Xu , Zhiqiang Wang , Xiaoli Li , Jiye Liang , Ru Li
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