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We present the Quantum Hamiltonian Analysis Toolkit (QHAT), a newly developed application that provides a user-friendly interface for studying Hamiltonians and performing Hamiltonian simulation on fault-tolerant quantum computers. QHAT…

The integration of artificial intelligence (AI) into pathology is advancing precision medicine by improving diagnosis, treatment planning, and patient outcomes. Digitised whole-slide images (WSIs) capture rich spatial and morphological…

Purpose: The goal is to develop a new architecture for computed tomography (CT) which is at an ultra-low-dose for developing countries, especially in rural areas. Methods: The proposed scheme is inspired by the recently developed…

Medical Physics · Physics 2013-12-23 Fenglin Liu , Hengyong Yu , Wenxiang Cong , Ge Wang

Purpose: To develop a model-based deep neural network for high-quality image reconstruction of undersampled multi-coil chemical exchange saturation transfer (CEST) data. Theory and Methods: Inspired by the variational network, the CEST…

Medical Physics · Physics 2023-05-26 Jianping Xu , Tao Zu , Yi-Cheng Hsu , Xiaoli Wang , Kannie W. Y. Chan , Yi Zhang

In this paper we describe EasyInterface, an open-source toolkit for rapid development of web-based graphical user interfaces (GUIs). This toolkit addresses the need of researchers to make their research prototype tools available to the…

Software Engineering · Computer Science 2017-02-02 Jesús Doménech , Samir Genaim , Einar Broch Johnsen , Rudolf Schlatte

The escalating global cancer burden underscores the critical need for precise diagnostic tools in oncology. This research employs deep learning to enhance lesion segmentation in PET/CT imaging, utilizing a dataset of 900 whole-body…

Computer Vision and Pattern Recognition · Computer Science 2024-09-17 Jiayi Liu , Qiaoyi Xue , Youdan Feng , Tianming Xu , Kaixin Shen , Chuyun Shen , Yuhang Shi

Nexus-CAT (Cluster Analysis Toolkit) is an open-source Python package for cluster detection and percolation analysis of atomistic simulation trajectories. Standard structural tools, such as the pair distribution function or structure…

Disordered Systems and Neural Networks · Physics 2026-04-14 Julien Perradin , Simona Ispas , Anwar Hasmy , Bernard Hehlen

Achieving fine-grained and structurally sound controllability is a cornerstone of advanced visual generation. Existing part-based frameworks treat user-provided parts as an unordered set and therefore ignore their intrinsic spatial and…

Computer Vision and Pattern Recognition · Computer Science 2026-04-08 Junbin Zhang , Meng Cao , Feng Tan , Yikai Lin , Yuexian Zou

Live time-lapse microscopy is essential for a wide range of biological applications. Software-based automation is the gold standard for the operation of hardware accessories necessary for image acquisition. Given that current software…

Image and Video Processing · Electrical Eng. & Systems 2019-06-20 Quang Long Pham , David Chege , Timothy Dijamco , Migle Surblyte , Akshay Naik , Kolawole Campbell , Nhat-Anh-Nguyen Tong , Roman Voronov

Recently, the self-supervised pre-training paradigm has shown great potential in leveraging large-scale unlabeled data to improve downstream task performance. However, increasing the scale of unlabeled pre-training data in real-world…

Computer Vision and Pattern Recognition · Computer Science 2022-12-13 Yiqi Lin , Huabin Zheng , Huaping Zhong , Jinjing Zhu , Weijia Li , Conghui He , Lin Wang

The increasing availability of high-quality optical and near-infrared spectroscopic data, as well as advances in modelling techniques, have greatly expanded the scientific potential of spectroscopic studies. However, the software tools…

Instrumentation and Methods for Astrophysics · Physics 2025-12-23 Daniele Gasparri , Lorenzo Morelli , Umberto Battino , Jairo Méndez Abreu , Adriana de Lorenzo-Cáceres

Many medical imaging techniques utilize fitting approaches for quantitative parameter estimation and analysis. Common examples are pharmacokinetic modeling in DCE MRI/CT, ADC calculations and IVIM modeling in diffusion-weighted MRI and…

Understanding the intricate workflows of cataract surgery requires modeling complex interactions between surgical tools, anatomical structures, and procedural techniques. Existing datasets primarily address isolated aspects of surgical…

Computer Vision and Pattern Recognition · Computer Science 2025-06-30 Felix Holm , Gözde Ünver , Ghazal Ghazaei , Nassir Navab

Image post-processing is used in clinical-grade ultrasound scanners to improve image quality (e.g., reduce speckle noise and enhance contrast). These post-processing techniques vary across manufacturers and are generally kept proprietary,…

Image and Video Processing · Electrical Eng. & Systems 2024-10-30 Ouwen Huang , Will Long , Nick Bottenus , Gregg E. Trahey , Sina Farsiu , Mark L. Palmeri

Contrastive Language-Image Pre-training (CLIP) is an approach that has advanced research and applications in computer vision, fueling modern recognition systems and generative models. We believe that the main ingredient to the success of…

Computer Vision and Pattern Recognition · Computer Science 2025-11-25 Hu Xu , Saining Xie , Xiaoqing Ellen Tan , Po-Yao Huang , Russell Howes , Vasu Sharma , Shang-Wen Li , Gargi Ghosh , Luke Zettlemoyer , Christoph Feichtenhofer

An increasing amount of research is being devoted to applying machine learning methods to electronic health record (EHR) data for various clinical purposes. This growing area of research has exposed the challenges of the accessibility of…

Machine Learning · Computer Science 2022-12-22 Mehak Gupta , Brennan Gallamoza , Nicolas Cutrona , Pranjal Dhakal , Raphael Poulain , Rahmatollah Beheshti

Advancements in medical imaging AI, particularly in 3D imaging, have been limited due to the scarcity of comprehensive datasets. We introduce CT-RATE, a public dataset that pairs 3D medical images with corresponding textual reports. CT-RATE…

Contrastive Language-Image Pre-training (CLIP), a simple yet effective pre-training paradigm, successfully introduces text supervision to vision models. It has shown promising results across various tasks due to its generalizability and…

Computer Vision and Pattern Recognition · Computer Science 2025-03-27 Zihao Zhao , Yuxiao Liu , Han Wu , Mei Wang , Yonghao Li , Sheng Wang , Lin Teng , Disheng Liu , Zhiming Cui , Qian Wang , Dinggang Shen

Brain-computer interface (BCI) is a communication system between humans and computers reflecting human intention without using a physical control device. Since deep learning is robust in extracting features from data, research on decoding…

Machine Learning · Computer Science 2022-12-14 Sung-Jin Kim , Dae-Hyeok Lee , Yeon-Woo Choi

Computer-aided diagnosis (CAD) has significantly advanced automated chest X-ray diagnosis but remains isolated from clinical workflows and lacks reliable decision support and interpretability. Human-AI collaboration seeks to enhance the…

Computer Vision and Pattern Recognition · Computer Science 2026-02-26 Shaoxuan Wu , Jingkun Chen , Chong Ma , Cong Shen , Xiao Zhang , Jun Feng