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Protein fold classification is a classic problem in structural biology and bioinformatics. We approach this problem using persistent homology. In particular, we use alpha shape filtrations to compare a topological representation of the data…
We extend the Gordon-Litherland pairing to links in thickened surfaces, and use it to define signature, determinant, and nullity invariants for links that bound (unoriented) spanning surfaces. The invariants are seen to depend only on the…
Topological data analysis (TDA) is a rising branch in modern applied mathematics. It extracts topological structures as features of a given space and uses these features to analyze digital data. Persistent homology, one of the central tools…
We prove the conjectured classification of topological phases in two spatial dimensions with gappable boundary, in a simplified setting. Two gapped ground states of lattice Hamiltonians are in the same quantum phase of matter, or…
Topological properties of solid states have sparked considerable recent interest due to their importance in the physics of lattices with a non-trivial basis and their potential in the design of novel materials. Here we describe an…
Hyperuniformity, the suppression of density fluctuations at large length scales, is observed across a wide variety of domains, from cosmology to condensed matter and biological systems. Although the standard definition of hyperuniformity…
We study time- and parameter-dependent ordinary differential equations in the geometric setting of vector fields and their flows. Various degrees of regularities in state are considered, including Lipschitz, finitely diferentiable, smooth,…
We obtain new invariants of topological link concordance and homology cobordism of 3-manifolds from Hirzebruch-type intersection form defects of towers of iterated p-covers. Our invariants can extract geometric information from an arbitrary…
Periodic Hamiltonians on a three-dimensional (3-D) lattice with a spectral gap not only on the bulk but also on two edges at the common Fermi level are considered. By using K-theory applied for the quarter-plane Toeplitz extension, two…
Coupled layer constructions are a valuable tool for capturing the universal properties of certain interacting quantum phases of matter in terms of the simpler data that characterizes the underlying layers. In the study of fracton phases,…
We introduce a new feature map for barcodes that arise in persistent homology computation. The main idea is to first realize each barcode as a path in a convenient vector space, and to then compute its path signature which takes values in…
For a topological flow $(V,\phi)$ - i.e., $V$ is a linearly compact vector space and $\phi$ a continuous endomorphism of $V$ - we gain a deep understanding of the relationship between $(V,\phi)$ and the Bernoulli shift: a topological flow…
We consider the diffraction of time-harmonic plane waves by a periodic structure, governed by the Helmholtz equation. Bound states in the continuum (BICs) are quasi-periodic fields that remain $L^{2}$-bounded over one period and occur at…
We identify a one-to-one correspondence between the charge localized around a dislocation characterized by a generic Burgers vector and the Berry phase associated with the electronic Bloch waves of two-dimensional crystalline insulators.…
We consider a model of an electron in a crystal moving under the influence of an external electric field: Schr\"{o}dinger's equation with a potential which is the sum of a periodic function and a general smooth function. We identify two…
We have observed the Berry phase effect associated with interband coherence in topological surface states (TSSs) using two-color high-harmonic spectroscopy. This Berry phase accumulates along the evolution path of strong field-driven…
We study topological properties of phase transition points of one-dimensional topological quantum phase transitions by assigning winding numbers defined on closed circles around the gap closing points in the parameter space of momentum and…
Topological materials are characterized by integer invariants that underpin their robust quantized electronic features, as famously exemplified by the Chern number in the integer quantum Hall effect. Yet, in most candidate systems, the…
We present a two-dimensional (2D) lattice model that exhibits a nontrivial topological phase in the absence of the Berry curvature. Instead, the Berry connection provides the topological nontrivial phase in the model, whose integration over…
Superpositions of plane waves are known to approximate well the solutions of the Helmholtz equation. Their use in discretizations is typical of Trefftz methods for Helmholtz problems, aiming to achieve high accuracy with a small number of…