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While significant progress has been made in automating various aspects of software development through coding agents, there is still significant room for improvement in their bug fixing capabilities. Debugging and investigation of runtime…

Software Engineering · Computer Science 2026-04-22 Spandan Garg , Yufan Huang

When assessing the quality of coding agents, predominant benchmarks focus on solving single issues on GitHub, such as SWE-Bench. In contrast, in real use, these agents solve more various and complex tasks that involve other skills such as…

Large language models (LLMs) have advanced rapidly from conversational problem solving to addressing real-world tasks involving tool use, such as software engineering (SWE). Recent LLM-powered toolkits, such as OpenAI Codex and Cursor, have…

Artificial Intelligence · Computer Science 2025-06-24 Haoran Wang , Zhenyu Hou , Yao Wei , Jie Tang , Yuxiao Dong

Recent advances in AI-assisted programming have empowered agents to execute complex workflows via command-line interfaces, however, existing benchmarks are limited by short task horizons, data contamination from GitHub scraping, and a lack…

The evolution of Large Language Models (LLMs) into autonomous agents has expanded the scope of AI coding from localized code generation to complex, repository-level, and execution-driven problem solving. However, current benchmarks…

Software Engineering · Computer Science 2026-01-19 Jie Yang , Honglin Guo , Li Ji , Jiazheng Zhou , Rui Zheng , Zhikai Lei , Shuo Zhang , Zhiheng Xi , Shichun Liu , Yuxin Wang , Bo Wang , Yining Zheng , Tao Gui , Xipeng Qiu

AI agents may soon become capable of autonomously completing valuable, long-horizon tasks in diverse domains. Current benchmarks either do not measure real-world tasks, or are not sufficiently difficult to meaningfully measure frontier…

Large Language Models (LLMs) have shown impressive capabilities in downstream software engineering tasks such as Automated Program Repair (APR). In particular, there has been a lot of research on repository-level issue-resolution benchmarks…

Software Engineering · Computer Science 2025-06-23 Anvith Pabba , Alex Mathai , Anindya Chakraborty , Baishakhi Ray

As single-cell RNA sequencing datasets grow in adoption, scale, and complexity, data analysis remains a bottleneck for many research groups. Although frontier AI agents have improved dramatically at software engineering and general data…

Genomics · Quantitative Biology 2026-02-11 Kenny Workman , Zhen Yang , Harihara Muralidharan , Aidan Abdulali , Hannah Le

Recent research builds various patching agents that combine large language models (LLMs) with non-ML tools and achieve promising results on the state-of-the-art (SOTA) software patching benchmark, SWE-bench. Based on how to determine the…

Robotics · Computer Science 2025-06-12 Hongwei Li , Yuheng Tang , Shiqi Wang , Wenbo Guo

Large Language Models (LLMs) are reshaping almost all industries, including software engineering. In recent years, a number of LLM agents have been proposed to solve real-world software problems. Such software agents are typically equipped…

Software Engineering · Computer Science 2025-11-25 Chunqiu Steven Xia , Zhe Wang , Yan Yang , Yuxiang Wei , Lingming Zhang

The rapid progress in Automated Program Repair (APR) has been driven by advances in AI, particularly large language models (LLMs) and agent-based systems. SWE-Bench is a recent benchmark designed to evaluate LLM-based repair systems using…

Software Engineering · Computer Science 2026-02-06 Matias Martinez , Xavier Franch

Agents based on Large Language Models (LLMs) have shown promise for performing sophisticated software engineering tasks autonomously. In addition, there has been progress towards developing agents that can perform parts of the research…

Computation and Language · Computer Science 2026-04-23 Nicholas Edwards , Yukyung Lee , Yujun Audrey Mao , Yulu Qin , Sebastian Schuster , Najoung Kim

Software engineering agents (SWE) are improving rapidly, with recent gains largely driven by reinforcement learning (RL). However, RL training is constrained by the scarcity of large-scale task collections with reproducible execution…

Software Engineering · Computer Science 2026-03-02 Ibragim Badertdinov , Maksim Nekrashevich , Anton Shevtsov , Alexander Golubev

AI agents have the potential to aid users on a variety of consequential tasks, including conducting scientific research. To spur the development of useful agents, we need benchmarks that are challenging, but more crucially, directly…

Computation and Language · Computer Science 2024-09-18 Zachary S. Siegel , Sayash Kapoor , Nitya Nagdir , Benedikt Stroebl , Arvind Narayanan

The integration of Large Language Models (LLMs) into software engineering has driven a transition from traditional rule-based systems to autonomous agentic systems capable of solving complex problems. However, systematic progress is…

Software Engineering · Computer Science 2025-10-24 Jiale Guo , Suizhi Huang , Mei Li , Dong Huang , Xingsheng Chen , Regina Zhang , Zhijiang Guo , Han Yu , Siu-Ming Yiu , Pietro Lio , Kwok-Yan Lam

Autonomous coding agents built on large language models (LLMs) can now solve many general software and machine learning tasks, but they remain ineffective on complex, domain-specific scientific problems. Medical imaging is a particularly…

Computer Vision and Pattern Recognition · Computer Science 2025-12-22 Roshan Kenia , Xiaoman Zhang , Pranav Rajpurkar

Agentic repository-level code understanding is essential for automating complex software engineering tasks, yet the field lacks reliable benchmarks. Existing evaluations often overlook the long tail topics and rely on popular repositories…

Recent advances in code agents have enabled automated software development at the project level, supported by large language models (LLMs). However, existing benchmarks for code agent evaluation face two major limitations. First, creating…

Software Engineering · Computer Science 2026-03-24 Lingyue Fu , Bolun Zhang , Hao Guan , Yaoming Zhu , Lin Qiu , Weiwen Liu , Xuezhi Cao , Xunliang Cai , Weinan Zhang , Yong Yu

Large Language Models (LLMs) have achieved impressive results on static code-generation benchmarks, but real-world software development unfolds as a continuous stream of evolving issues, fixes, and feature requests. We introduce…

Machine Learning · Computer Science 2025-07-02 Thomas Joshi , Shayan Chowdhury , Fatih Uysal

The rapid progress in Automated Program Repair (APR) has been fueled by advances in AI, particularly large language models (LLMs) and agent-based systems. SWE-Bench is a benchmark designed to evaluate repair systems using real issues mined…

Software Engineering · Computer Science 2026-02-05 Matias Martinez , Xavier Franch
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