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MOTIVATION: Proteins fold into complex structures that are crucial for their biological functions. Experimental determination of protein structures is costly and therefore limited to a small fraction of all known proteins. Hence, different…

Biomolecules · Quantitative Biology 2018-04-18 David Menéndez Hurtado , Karolis Uziela , Arne Elofsson

Disentanglement is a useful property in representation learning which increases the interpretability of generative models such as Variational autoencoders (VAE), Generative Adversarial Models, and their many variants. Typically in such…

Machine Learning · Computer Science 2022-05-31 Arun Pandey , Michael Fanuel , Joachim Schreurs , Johan A. K. Suykens

We propose and study a method for learning interpretable representations for the task of regression. Features are represented as networks of multi-type expression trees comprised of activation functions common in neural networks in addition…

Neural and Evolutionary Computing · Computer Science 2019-03-26 William La Cava , Tilak Raj Singh , James Taggart , Srinivas Suri , Jason H. Moore

Constructing high-quality features is critical to any quantitative data analysis. While feature engineering was historically addressed by carefully hand-crafting data representations based on domain expertise, deep neural networks (DNNs)…

Machine Learning · Computer Science 2025-02-25 Max Vargas , Reilly Cannon , Andrew Engel , Anand D. Sarwate , Tony Chiang

Deep Convolutional Neural Networks (CNN) have exhibited superior performance in many visual recognition tasks including image classification, object detection, and scene label- ing, due to their large learning capacity and resistance to…

Computer Vision and Pattern Recognition · Computer Science 2016-10-12 Miao Sun , Tony X. Han , Xun Xu , Ming-Chang Liu , Ahmad Khodayari-Rostamabad

We present a deep transformation model for probabilistic regression. Deep learning is known for outstandingly accurate predictions on complex data but in regression tasks, it is predominantly used to just predict a single number. This…

Machine Learning · Statistics 2020-04-02 Beate Sick , Torsten Hothorn , Oliver Dürr

Feature attribution (FA), or the assignment of class-relevance to different locations in an image, is important for many classification problems but is particularly crucial within the neuroscience domain, where accurate mechanistic models…

Machine Learning · Computer Science 2020-06-17 Cher Bass , Mariana da Silva , Carole Sudre , Petru-Daniel Tudosiu , Stephen M. Smith , Emma C. Robinson

Interpretability in machine learning models is important in high-stakes decisions, such as whether to order a biopsy based on a mammographic exam. Mammography poses important challenges that are not present in other computer vision tasks:…

Machine Learning · Computer Science 2021-03-24 Alina Jade Barnett , Fides Regina Schwartz , Chaofan Tao , Chaofan Chen , Yinhao Ren , Joseph Y. Lo , Cynthia Rudin

Interest in quantum machine learning is increasingly growing due to its potential to offer more efficient solutions for problems that are difficult to tackle with classical methods. In this context, the research work presented here focuses…

Quantum Physics · Physics 2025-04-11 A. De Lorenzis , M. P. Casado , M. P. Estarellas , N. Lo Gullo , T. Lux , F. Plastina , A. Riera , J. Settino

A common trait of many machine learning models is that it is often difficult to understand and explain what caused the model to produce the given output. While the explainability of neural networks has been an active field of research in…

There is a growing concern about typically opaque decision-making with high-performance machine learning algorithms. Providing an explanation of the reasoning process in domain-specific terms can be crucial for adoption in risk-sensitive…

Computer Vision and Pattern Recognition · Computer Science 2022-11-28 Aditya Chattopadhyay , Stewart Slocum , Benjamin D. Haeffele , Rene Vidal , Donald Geman

The rapid development of quantum dot (QD) devices for quantum computing has necessitated more efficient and automated methods for device characterization and tuning. This work demonstrates the feasibility and advantages of applying…

Computer Vision and Pattern Recognition · Computer Science 2025-01-14 Daniel Schug , Tyler J. Kovach , M. A. Wolfe , Jared Benson , Sanghyeok Park , J. P. Dodson , J. Corrigan , M. A. Eriksson , Justyna P. Zwolak

The Intelligent Fault Diagnosis of rotating machinery currently proposes some captivating challenges. Although results achieved by artificial intelligence and deep learning constantly improve, this field is characterized by several open…

Signal Processing · Electrical Eng. & Systems 2022-07-26 Eugenio Brusa , Cristiana Delprete , Luigi Gianpio Di Maggio

With the growing adoption of AI-based systems across everyday life, the need to understand their decision-making mechanisms is correspondingly increasing. The level at which we can trust the statistical inferences made from AI-based…

Machine Learning · Statistics 2024-04-15 Adam Spannaus , Heidi A. Hanson , Lynne Penberthy , Georgia Tourassi

Research in Explainable Artificial Intelligence (XAI) is increasing, aiming to make deep learning models more transparent. Most XAI methods focus on justifying the decisions made by Artificial Intelligence (AI) systems in security-relevant…

There has been growing excitement over the possibility of employing artificial neural networks (ANNs) to gain new theoretical insight into the physics of quantum many-body problems. ``Interpretability'' remains a concern: can we understand…

Disordered Systems and Neural Networks · Physics 2020-12-08 Yi Zhang , Paul Ginsparg , Eun-Ah Kim

With the success of deep learning, recent efforts have been focused on analyzing how learned networks make their classifications. We are interested in analyzing the network output based on the network structure and information flow through…

Machine Learning · Computer Science 2018-02-13 Sandeep Konam , Ian Quah , Stephanie Rosenthal , Manuela Veloso

Deep neural networks are ubiquitous due to the ease of developing models and their influence on other domains. At the heart of this progress is convolutional neural networks (CNNs) that are capable of learning representations or features…

Computer Vision and Pattern Recognition · Computer Science 2020-10-26 Mohammed Bany Muhammad , Mohammed Yeasin

Image classification is an important task in various machine learning applications. In recent years, a number of classification methods based on quantum machine learning and different quantum image encoding techniques have been proposed. In…

Computer Vision and Pattern Recognition · Computer Science 2021-06-24 Denny Mattern , Darya Martyniuk , Henri Willems , Fabian Bergmann , Adrian Paschke

Deep clustering - joint representation learning and latent space clustering - is a well studied problem especially in computer vision and text processing under the deep learning framework. While the representation learning is generally…

Computer Vision and Pattern Recognition · Computer Science 2026-01-06 Bishwajit Saha , Dmitry Krotov , Mohammed J. Zaki , Parikshit Ram