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Tumor segmentation in whole-slide images of histology slides is an important step towards computer-assisted diagnosis. In this work, we propose a tumor segmentation framework based on the novel concept of persistent homology profiles…

Computer Vision and Pattern Recognition · Computer Science 2018-05-11 Talha Qaiser , Yee-Wah Tsang , Daiki Taniyama , Naoya Sakamoto , Kazuaki Nakane , David Epstein , Nasir Rajpoot

Semantic segmentation of electron microscopy (EM) images of biological samples remains a challenge in the life sciences. EM data captures details of biological structures, sometimes with such complexity that even human observers can find it…

Computer Vision and Pattern Recognition · Computer Science 2025-11-03 Sheida Rahnamai Kordasiabi , Damian Dalle Nogare , Florian Jug

Accurate liver segmentation in multi-phase MRI is vital for liver fibrosis assessment, yet labeled data is often scarce and unevenly distributed across imaging modalities and vendor systems. We propose a label-efficient segmentation…

Computer Vision and Pattern Recognition · Computer Science 2026-04-15 Quang-Khai Bui-Tran , Minh-Toan Dinh , Thanh-Huy Nguyen , Ba-Thinh Lam , Mai-Anh Vu , Ulas Bagci

We propose a novel method for semantic segmentation, the task of labeling each pixel in an image with a semantic class. Our method combines the advantages of the two main competing paradigms. Methods based on region classification offer…

Computer Vision and Pattern Recognition · Computer Science 2016-07-27 Holger Caesar , Jasper Uijlings , Vittorio Ferrari

Segmentation of tumors in brain MRI images is a challenging task, where most recent methods demand large volumes of data with pixel-level annotations, which are generally costly to obtain. In contrast, image-level annotations, where only…

Image and Video Processing · Electrical Eng. & Systems 2019-11-07 Sergey Pavlov , Alexey Artemov , Maksim Sharaev , Alexander Bernstein , Evgeny Burnaev

The need for labour intensive pixel-wise annotation is a major limitation of many fully supervised learning methods for segmenting bioimages that can contain numerous object instances with thin separations. In this paper, we introduce a…

Computer Vision and Pattern Recognition · Computer Science 2020-09-11 Rihuan Ke , Aurélie Bugeau , Nicolas Papadakis , Peter Schuetz , Carola-Bibiane Schönlieb

While fine-tuning pre-trained networks has become a popular way to train image segmentation models, such backbone networks for image segmentation are frequently pre-trained using image classification source datasets, e.g., ImageNet. Though…

Computer Vision and Pattern Recognition · Computer Science 2022-07-08 Xuhong Li , Haoyi Xiong , Yi Liu , Dingfu Zhou , Zeyu Chen , Yaqing Wang , Dejing Dou

Despite signi cant progress in semi-supervised medical image segmentation, most existing segmentation networks overlook e ective methodological guidance for feature extraction and important prior information from datasets. In this paper, we…

Computer Vision and Pattern Recognition · Computer Science 2025-09-05 Junying Meng , Gangxuan Zhou , Jun Liu , Weihong Guo

In semi-supervised segmentation, capturing meaningful semantic structures from unlabeled data is essential. This is particularly challenging in histopathology image analysis, where objects are densely distributed. To address this issue, we…

Computer Vision and Pattern Recognition · Computer Science 2025-10-03 Meilong Xu , Xiaoling Hu , Shahira Abousamra , Chen Li , Chao Chen

Weakly-supervised learning has attracted growing research attention on medical lesions segmentation due to significant saving in pixel-level annotation cost. However, 1) most existing methods require effective prior and constraints to…

Computer Vision and Pattern Recognition · Computer Science 2020-12-09 Jiahua Dong , Yang Cong , Gan Sun , Yunsheng Yang , Xiaowei Xu , Zhengming Ding

Semantic segmentation with fine-grained pixel-level accuracy is a fundamental component of a variety of computer vision applications. However, despite the large improvements provided by recent advances in the architectures of convolutional…

Computer Vision and Pattern Recognition · Computer Science 2020-05-13 Philipe A. Dias , Henry Medeiros

Weakly supervised learning with scribble annotations uses sparse user-drawn strokes to indicate segmentation labels on a small subset of pixels. This annotation reduces the cost of dense pixel-wise labeling, but suffers inherently from…

Computer Vision and Pattern Recognition · Computer Science 2026-02-13 Yeva Gabrielyan , Varduhi Yeghiazaryan , Irina Voiculescu

Volumetric lesion segmentation from computed tomography (CT) images is a powerful means to precisely assess multiple time-point lesion/tumor changes. However, because manual 3D segmentation is prohibitively time consuming, current practices…

Computer Vision and Pattern Recognition · Computer Science 2018-07-04 Jinzheng Cai , Youbao Tang , Le Lu , Adam P. Harrison , Ke Yan , Jing Xiao , Lin Yang , Ronald M. Summers

Supervised learning algorithms based on Convolutional Neural Networks have become the benchmark for medical image segmentation tasks, but their effectiveness heavily relies on a large amount of labeled data. However, annotating medical…

Image and Video Processing · Electrical Eng. & Systems 2023-11-20 Tao Wang , Yuanbin Chen , Xinlin Zhang , Yuanbo Zhou , Junlin Lan , Bizhe Bai , Tao Tan , Min Du , Qinquan Gao , Tong Tong

The early detection, diagnosis and monitoring of liver cancer progression can be achieved with the precise delineation of metastatic tumours. However, accurate automated segmentation remains challenging due to the presence of noise,…

Machine Learning · Computer Science 2015-09-02 Samuel Kadoury , Eugene Vorontsov , An Tang

Purpose: Lung nodule segmentation, i.e., the algorithmic delineation of the lung nodule surface, is a fundamental component of computational nodule analysis pipelines. We propose a new method for segmentation that is a machine learning…

Image and Video Processing · Electrical Eng. & Systems 2021-01-20 Matthew C Hancock , Jerry F Magnan

Contrastive learning, which aims to capture general representation from unlabeled images to initialize the medical analysis models, has been proven effective in alleviating the high demand for expensive annotations. Current methods mainly…

Computer Vision and Pattern Recognition · Computer Science 2022-08-18 Huai Chen , Renzhen Wang , Xiuying Wang , Jieyu Li , Qu Fang , Hui Li , Jianhao Bai , Qing Peng , Deyu Meng , Lisheng Wang

In semantic segmentation, the accuracy of models heavily depends on the high-quality annotations. However, in many practical scenarios, such as medical imaging and remote sensing, obtaining true annotations is not straightforward and…

Image and Video Processing · Electrical Eng. & Systems 2026-04-07 Ryu Tadokoro , Tsukasa Takagi , Shin-ichi Maeda

Medical image segmentation methods are generally designed as fully-supervised to guarantee model performance, which require a significant amount of expert annotated samples that are high-cost and laborious. Semi-supervised image…

Computer Vision and Pattern Recognition · Computer Science 2023-10-10 Xiangyu Zhao , Zengxin Qi , Sheng Wang , Qian Wang , Xuehai Wu , Ying Mao , Lichi Zhang

Visual place recognition is a challenging task for autonomous driving and robotics, which is usually considered as an image retrieval problem. A commonly used two-stage strategy involves global retrieval followed by re-ranking using…

Computer Vision and Pattern Recognition · Computer Science 2025-04-01 Yanqing Shen , Sanping Zhou , Jingwen Fu , Ruotong Wang , Shitao Chen , Nanning Zheng