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Single-cell gene expression data provide invaluable resources for systematic characterization of cellular hierarchy in multi-cellular organisms. However, cell lineage reconstruction is still often associated with significant uncertainty due…

Quantitative Methods · Quantitative Biology 2016-01-13 Gregory Giecold , Eugenio Marco , Lorenzo Trippa , Guo-Cheng Yuan

A huge amount of data has been acquired with the GREGOR Fabry-P\'erot Interferometer (GFPI), large-format facility cameras, and since 2016 with the High-resolution Fast Imager (HiFI). These data are processed in standardized procedures with…

Instrumentation and Methods for Astrophysics · Physics 2017-09-20 C. Kuckein , C. Denker , M. Verma , H. Balthasar , S. J. González Manrique , R. E. Louis , A. Diercke

We present HSIM: a dedicated pipeline for simulating observations with the HARMONI integral field spectrograph on the European Extremely Large Telescope. HSIM takes high spectral and spatial resolution input data-cubes, encoding physical…

Instrumentation and Methods for Astrophysics · Physics 2015-09-30 S. Zieleniewski , N. Thatte , S. Kendrew , R. C. W. Houghton , A. M. Swinbank , M. Tecza , F. Clarke , T. Fusco

We describe a versatile pipeline for processing the data collected by the Ultra-Violet Imaging Telescope (UVIT) on board Indian Multi-wavelength astronomical satellite AstroSat.The UVIT instrument carries out simultaneous astronomical…

Instrumentation and Methods for Astrophysics · Physics 2022-10-26 S. K. Ghosh , S. N. Tandon , S. K. Singh , D. S. Shelat , P. Tahlani , A. K. Singh , T. P. Srinivasan , P. Joseph , A. Devaraj , K. George , R. Mohan , J. Postma , C. S. Stalin

We apply information-based complexity analysis to support vector machine (SVM) algorithms, with the goal of a comprehensive continuous algorithmic analysis of such algorithms. This involves complexity measures in which some higher order…

Machine Learning · Statistics 2012-12-20 Mark A. Kon

Subspace identification methods (SIMs) are known for their simple parameterization for MIMO systems and robust numerical properties. However, a comprehensive statistical analysis of SIMs remains an open problem. Following a three-step…

Systems and Control · Electrical Eng. & Systems 2025-09-18 Jiabao He , Ingvar Ziemann , Cristian R. Rojas , S. Joe Qin , Håkan Hjalmarsson

Time-series learning is the bread and butter of data-driven *clinical decision support*, and the recent explosion in ML research has demonstrated great potential in various healthcare settings. At the same time, medical time-series problems…

Machine Learning · Computer Science 2023-10-31 Daniel Jarrett , Jinsung Yoon , Ioana Bica , Zhaozhi Qian , Ari Ercole , Mihaela van der Schaar

The Spectrometer and Telescope for Imaging X-rays (STIX) on board Solar Orbiter observes solar X-ray emission in the range of 4 – 150 keV and produces spectra and images of solar flares over a wide range of flare magnitudes. During…

The effectiveness of the machine learning methods for real-world tasks depends on the proper structure of the modeling pipeline. The proposed approach is aimed to automate the design of composite machine learning pipelines, which is…

Large Vision Language Models (VLMs), such as CLIP, have significantly contributed to various computer vision tasks, including object recognition and object detection. Their open vocabulary feature enhances their value. However, their…

Computer Vision and Pattern Recognition · Computer Science 2024-04-22 Ali Rasekh , Sepehr Kazemi Ranjbar , Milad Heidari , Wolfgang Nejdl

KMOS is a multi-object near-infrared integral field spectrometer with 24 deployable pick-off arms. Data processing is inevitably complex. We discuss specific issues and requirements that must be addressed in the data reduction pipeline, the…

Instrumentation and Methods for Astrophysics · Physics 2015-05-19 Richard Davies , Alex Agudo Berbel , Erich Wiezorrek , Thomas Ott , Natascha Foerster Schreiber

Data analysis and performance evaluation of simulation deduction plays a pivotal role in modern warfare, which enables military personnel to gain invaluable insights into the potential effectiveness of different strategies, tactics, and…

Computation and Language · Computer Science 2025-11-17 Shansi Zhang , Min Li

SDAMS is the ensemble of database + software packages aimed to the archiving, quick-look analysis, off-line analysis, network accessibility and plotting of the SPOrt produced data. Many of the aspects related to data archiving, analysis and…

Astrophysics · Physics 2019-08-15 L. Nicastro , G. Calderone

We present the current status of two new fully automated reduction and analysis pipelines, built for the Euler telescope and the CORALIE spectrograph. Both pipelines have been designed and built independently at the Universidad de Chile and…

Earth and Planetary Astrophysics · Physics 2010-12-16 James S. Jenkins , Andres Jordan

A data analysis pipeline is a structured sequence of steps that transforms raw data into meaningful insights by integrating various analysis algorithms. In this paper, we propose a novel statistical test to assess the significance of data…

Machine Learning · Statistics 2024-10-15 Tomohiro Shiraishi , Tatsuya Matsukawa , Shuichi Nishino , Ichiro Takeuchi

As the deployment of computer vision technology becomes increasingly common in science, the need for explanations of the system and its output has become a focus of great concern. Driven by the pressing need for interpretable models in…

Computer Vision and Pattern Recognition · Computer Science 2023-12-01 Daniel Schug , Sai Yerramreddy , Rich Caruana , Craig Greenberg , Justyna P. Zwolak

Document parsing (DP) transforms unstructured or semi-structured documents into structured, machine-readable representations, enabling downstream applications such as knowledge base construction and retrieval-augmented generation (RAG).…

We present EviSearch, a multi-agent extraction system that automates the creation of ontology-aligned clinical evidence tables directly from native trial PDFs while guaranteeing per-cell provenance for audit and human verification.…

We present The MKID Pipeline, a general use science data pipeline for the reduction and analysis of ultraviolet, optical and infrared (UVOIR) Microwave Kinetic Inductance Detector (MKID) data sets. This paper provides an introduction to the…

Instrumentation and Methods for Astrophysics · Physics 2022-03-04 Sarah Steiger , John I. Bailey , Nicholas Zobrist , Noah Swimmer , Rupert Dodkins , Kristina K. Davis , Benjamin A. Mazin

Machine Learning Operations (MLOps) has become increasingly critical as more organisations move ML models into production. However, the growing landscape of MLOps solutions has introduced complexity for practitioners trying to select…

Software Engineering · Computer Science 2026-04-21 Zakkarija Micallef , Keerthiga Rajenthiram , Ilias Gerostathopoulos
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