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Lempel-Ziv (LZ77 or, briefly, LZ) is one of the most effective and widely-used compressors for repetitive texts. However, the existing efficient methods computing the exact LZ parsing have to use linear or close to linear space to index the…

Data Structures and Algorithms · Computer Science 2020-05-12 Dmitry Kosolobov , Daniel Valenzuela , Gonzalo Navarro , Simon J. Puglisi

The fundamental question considered in algorithms on strings is that of indexing, that is, preprocessing a given string for specific queries. By now we have a number of efficient solutions for this problem when the queries ask for an exact…

Data Structures and Algorithms · Computer Science 2023-04-04 Paweł Gawrychowski , Garance Gourdel , Tatiana Starikovskaya , Teresa Anna Steiner

Grammar based compression, where one replaces a long string by a small context-free grammar that generates the string, is a simple and powerful paradigm that captures many popular compression schemes. In this paper, we present a novel…

Data Structures and Algorithms · Computer Science 2013-10-30 Philip Bille , Gad M. Landau , Rajeev Raman , Kunihiko Sadakane , Srinivasa Rao Satti , Oren Weimann

In grammar-based compression a string is represented by a context-free grammar, also called a straight-line program (SLP), that generates only that string. We refine a recent balancing result stating that one can transform an SLP of size…

Data Structures and Algorithms · Computer Science 2021-07-02 Moses Ganardi

Two decades ago, a breakthrough in indexing string collections made it possible to represent them within their compressed space while at the same time offering indexed search functionalities. As this new technology permeated through…

Data Structures and Algorithms · Computer Science 2022-11-28 Gonzalo Navarro

The compact directed acyclic word graph (CDAWG) is the minimal compact automaton that recognizes all the suffixes of a string. Classically the CDAWG has been implemented as an index of the string it recognizes, requiring $o(n)$ space for a…

Data Structures and Algorithms · Computer Science 2024-07-15 Alan M. Cleary , Joseph Winjum , Jordan Dood , Shunsuke Inenaga

Most of the fastest-growing string collections today are repetitive, that is, most of the constituent documents are similar to many others. As these collections keep growing, a key approach to handling them is to exploit their…

Information Retrieval · Computer Science 2017-05-22 Travis Gagie , Aleksi Hartikainen , Kalle Karhu , Juha Kärkkäinen , Gonzalo Navarro , Simon J. Puglisi , Jouni Sirén

We first review how we can store a run-length compressed suffix array (RLCSA) for a text $T$ of length $n$ over an alphabet of size $\sigma$ whose Burrows-Wheeler Transform (BWT) consists of $r$ runs in $O \left( \rule{0ex}{2ex} r \log (n /…

Data Structures and Algorithms · Computer Science 2025-04-22 Nathaniel K. Brown , Travis Gagie , Giovanni Manzini , Gonzalo Navarro , Marinella Sciortino

In this paper we investigate the problem of building a static data structure that represents a string s using space close to its compressed size, and allows fast access to individual characters of s. This type of structures was investigated…

Computational Complexity · Computer Science 2012-05-04 Shiteng Chen , Elad Verbin , Wei Yu

We show how to compress string dictionaries using the Lempel-Ziv (LZ78) data compression algorithm. Our approach is validated experimentally on dictionaries of up to 1.5 GB of uncompressed text. We achieve compression ratios often…

Data Structures and Algorithms · Computer Science 2013-05-06 Julian Arz , Johannes Fischer

Countless variants of the Lempel-Ziv compression are widely used in many real-life applications. This paper is concerned with a natural modification of the classical pattern matching problem inspired by the popularity of such compression…

Data Structures and Algorithms · Computer Science 2011-04-22 Pawel Gawrychowski

Given a dataset of $n$ user-contributed strings, each of length at most $\ell$, a key problem is how to identify all frequent substrings while preserving each user's privacy. Recent work by Bernardini et al. (PODS'25) introduced a…

Data Structures and Algorithms · Computer Science 2026-03-11 Peaker Guo , Rayne Holland , Hao Wu

Sequence representations supporting not only direct access to their symbols, but also rank/select operations, are a fundamental building block in many compressed data structures. Several recent applications need to represent highly…

Data Structures and Algorithms · Computer Science 2019-11-25 Alberto Ordóñez , Gonzalo Navarro , Nieves R. Brisaboa

A longest common extension (LCE) query on a string computes the length of the longest common suffix or prefix at two given positions. A dynamic LCE algorithm maintains a data structure that allows efficient LCE queries on a string that can…

Data Structures and Algorithms · Computer Science 2026-04-15 Daniel Albert

We describe how, given a text $T [1..n]$ and a positive constant $\epsilon$, we can build a simple $O (z \log n)$-space index, where $z$ is the number of phrases in the LZ77 parse of $T$, such that later, given a pattern $P [1..m]$, in $O…

Data Structures and Algorithms · Computer Science 2022-12-06 Nick Fagan , Jorge Hermo González , Travis Gagie

While several self-indexes for highly repetitive texts exist, developing a practical self-index applicable to real world repetitive texts remains a challenge. ESP-index is a grammar-based self-index on the notion of edit-sensitive parsing…

Data Structures and Algorithms · Computer Science 2014-04-29 Yoshimasa Takabatake , Yasuo Tabei , Hiroshi Sakamoto

An indexed sequence of strings is a data structure for storing a string sequence that supports random access, searching, range counting and analytics operations, both for exact matches and prefix search. String sequences lie at the core of…

Data Structures and Algorithms · Computer Science 2012-04-17 Roberto Grossi , Giuseppe Ottaviano

Given a string $S$ of length $n$, the classic string indexing problem is to preprocess $S$ into a compact data structure that supports efficient subsequent pattern queries. In the \emph{deterministic} variant the goal is to solve the string…

Data Structures and Algorithms · Computer Science 2016-12-07 Philip Bille , Inge Li Gørtz , Frederik Rye Skjoldjensen

The Lempel-Ziv 77 (LZ77) factorization is a fundamental compression scheme widely used in text processing and data compression. In this work, we investigate the time complexity of maintaining the LZ77 factorization of a dynamic string. By…

Data Structures and Algorithms · Computer Science 2025-10-28 Itai Boneh , Shay Golan , Matan Kraus

The circular dictionary matching problem is an extension of the classical dictionary matching problem where every string in the dictionary is interpreted as a circular string: after reading the last character of a string, we can move back…

Data Structures and Algorithms · Computer Science 2025-04-07 Nicola Cotumaccio
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