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Metagenomic binning aims to cluster DNA fragments from mixed microbial samples into their respective genomes, a critical step for downstream analyses of microbial communities. Existing methods rely on deterministic representations, such as…

Machine Learning · Computer Science 2025-10-01 Abdulkadir Celikkanat , Andres R. Masegosa , Mads Albertsen , Thomas D. Nielsen

We present a gradient-tree-boosting-based structured learning model for jointly disambiguating named entities in a document. Gradient tree boosting is a widely used machine learning algorithm that underlies many top-performing natural…

Computation and Language · Computer Science 2018-04-25 Yi Yang , Ozan Irsoy , Kazi Shefaet Rahman

Interpretability is crucial for machine learning in many scenarios such as quantitative finance, banking, healthcare, etc. Symbolic regression (SR) is a classic interpretable machine learning method by bridging X and Y using mathematical…

Methodology · Statistics 2020-01-17 Ying Jin , Weilin Fu , Jian Kang , Jiadong Guo , Jian Guo

Relating speech to EEG holds considerable importance but is challenging. In this study, a deep convolutional network was employed to extract spatiotemporal features from EEG data. Self-supervised speech representation and contextual text…

Signal Processing · Electrical Eng. & Systems 2024-02-02 Bo Wang , Xiran Xu , Zechen Zhang , Haolin Zhu , YuJie Yan , Xihong Wu , Jing Chen

Polygenic risk scores (PRS) have recently received much attention for genetics risk prediction. While successful for the Caucasian population, the PRS based on the minority population suffer from small sample sizes, high dimensionality and…

Current face recognition systems achieve high progress on several benchmark tests. Despite this progress, recent works showed that these systems are strongly biased against demographic sub-groups. Consequently, an easily integrable solution…

Computer Vision and Pattern Recognition · Computer Science 2020-11-06 Philipp Terhörst , Jan Niklas Kolf , Naser Damer , Florian Kirchbuchner , Arjan Kuijper

Word embeddings are usually derived from corpora containing text from many individuals, thus leading to general purpose representations rather than individually personalized representations. While personalized embeddings can be useful to…

Computation and Language · Computer Science 2020-11-22 Charles Welch , Jonathan K. Kummerfeld , Verónica Pérez-Rosas , Rada Mihalcea

In this paper, we present a novel approach to accelerate the Bayesian inference process, focusing specifically on the nested sampling algorithms. Bayesian inference plays a crucial role in cosmological parameter estimation, providing a…

Instrumentation and Methods for Astrophysics · Physics 2024-10-17 Isidro Gómez-Vargas , J. Alberto Vázquez

We introduce Selective Greedy Equivalence Search (SGES), a restricted version of Greedy Equivalence Search (GES). SGES retains the asymptotic correctness of GES but, unlike GES, has polynomial performance guarantees. In particular, we show…

Machine Learning · Computer Science 2015-06-09 David Maxwell Chickering , Christopher Meek

In recent years, significant progress has been made in face recognition, which can be partially attributed to the availability of large-scale labeled face datasets. However, since the faces in these datasets usually contain limited degree…

Computer Vision and Pattern Recognition · Computer Science 2021-04-20 Yichun Shi , Anil K. Jain

Unsupervised person re-identification has achieved great success through the self-improvement of individual neural networks. However, limited by the lack of diversity of discriminant information, a single network has difficulty learning…

Computer Vision and Pattern Recognition · Computer Science 2023-06-09 Yunpeng Zhai , Peixi Peng , Mengxi Jia , Shiyong Li , Weiqiang Chen , Xuesong Gao , Yonghong Tian

Embedding methods have achieved success in face recognition by comparing facial features in a latent semantic space. However, in a fully unconstrained face setting, the facial features learned by the embedding model could be ambiguous or…

Computer Vision and Pattern Recognition · Computer Science 2019-08-08 Yichun Shi , Anil K. Jain

We present our 7th place solution to the Gendered Pronoun Resolution challenge, which uses BERT without fine-tuning and a novel augmentation strategy designed for contextual embedding token-level tasks. Our method anonymizes the referent by…

Computation and Language · Computer Science 2019-06-12 Bo Liu

Despite exceptional predictive performance of Deep sequence models (DSMs), the main concern of their deployment centers around the lack of uncertainty awareness. In contrast, probabilistic models quantify the uncertainty associated with…

Machine Learning · Computer Science 2026-03-03 Wenlong Chen

Text-embedding models often exhibit biases arising from the data on which they are trained. In this paper, we examine a hitherto unexplored bias in text-embeddings: bias arising from the presence of $\textit{names}$ such as persons,…

Computation and Language · Computer Science 2025-02-06 Sahil Manchanda , Pannaga Shivaswamy

Network embedding algorithms are able to learn latent feature representations of nodes, transforming networks into lower dimensional vector representations. Typical key applications, which have effectively been addressed using network…

Machine Learning · Computer Science 2018-09-10 Duong Nguyen , Fragkiskos D. Malliaros

Graph embedding is a central problem in social network analysis and many other applications, aiming to learn the vector representation for each node. While most existing approaches need to specify the neighborhood and the dependence form to…

Machine Learning · Computer Science 2018-06-06 Shupeng Gui , Xiangliang Zhang , Shuang Qiu , Mingrui Wu , Jieping Ye , Ji Liu

Current advances in Natural Language Processing (NLP) have made it increasingly feasible to build applications leveraging textual data. Generally, the core of these applications rely on having a good semantic representation of text into…

Computation and Language · Computer Science 2024-10-21 Thomas Uriot

Social bias in machine learning has drawn significant attention, with work ranging from demonstrations of bias in a multitude of applications, curating definitions of fairness for different contexts, to developing algorithms to mitigate…

Computation and Language · Computer Science 2019-11-06 Yi Chern Tan , L. Elisa Celis

Image clustering aims to partition unlabeled image datasets into distinct groups. A core aspect of this task is constructing and leveraging prior knowledge to guide the clustering process. Recent approaches introduce semantic descriptions…

Computer Vision and Pattern Recognition · Computer Science 2026-05-26 Feijiang Li , Zhenxiong Li , Jieting Wang , Zizheng Jiu , Saixiong Liu , Liang Du
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