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Graph learning is crucial in the fields of bioinformatics, social networks, and chemicals. Although high-order graphlets, such as cycles, are critical to achieving an informative graph representation for node classification, edge…

Machine Learning · Computer Science 2024-02-14 Ziquan Wei , Tingting Dan , Guorong Wu

Graph Neural Networks (GNNs) show strong expressive power on graph data mining, by aggregating information from neighbors and using the integrated representation in the downstream tasks. The same aggregation methods and parameters for each…

Machine Learning · Computer Science 2022-03-22 Xiaojun Ma , Qin Chen , Yuanyi Ren , Guojie Song , Liang Wang

We introduce Graph Concept Bottleneck (GCB) as a new paradigm for self-explainable text-attributed graph learning. GCB maps graphs into a subspace, concept bottleneck, where each concept is a meaningful phrase, and predictions are made…

Machine Learning · Computer Science 2026-04-15 Xiaoxue Han , Libo Zhang , Zining Zhu , Yue Ning

Graph neural networks are popular architectures for graph machine learning, based on iterative computation of node representations of an input graph through a series of invariant transformations. A large class of graph neural networks…

Machine Learning · Computer Science 2024-06-11 Ben Finkelshtein , Xingyue Huang , Michael Bronstein , İsmail İlkan Ceylan

Inferring temporal interaction graphs and higher-order structure from neural signals is a key problem in building generative models for systems neuroscience. Foundation models for large-scale neural data represent shared latent structures…

Machine Learning · Computer Science 2025-08-26 Nathan X. Kodama , Kenneth A. Loparo

Recent advances in graph convolutional networks have significantly improved the performance of chemical predictions, raising a new research question: "how do we explain the predictions of graph convolutional networks?" A possible approach…

Machine Learning · Computer Science 2018-07-06 Hirotaka Akita , Kosuke Nakago , Tomoki Komatsu , Yohei Sugawara , Shin-ichi Maeda , Yukino Baba , Hisashi Kashima

Graph neural networks have received increased attention over the past years due to their promising ability to handle graph-structured data, which can be found in many real-world problems such as recommended systems and drug synthesis. Most…

Machine Learning · Computer Science 2023-01-27 Xiangyu Wang , Xueming Yan , Yaochu Jin

Scene graphs are powerful representations that parse images into their abstract semantic elements, i.e., objects and their interactions, which facilitates visual comprehension and explainable reasoning. On the other hand, commonsense…

Computer Vision and Pattern Recognition · Computer Science 2020-07-21 Alireza Zareian , Svebor Karaman , Shih-Fu Chang

Despite their success in various domains, the growing dependence on GNNs raises a critical concern about the nature of the combinatorial reasoning underlying their predictions, which is often hidden within their black-box architectures.…

Machine Learning · Computer Science 2026-03-03 Yue Niu , Zhaokai Sun , Jiayi Yang , Xiaofeng Cao , Rui Fan , Xin Sun , Hanli Wang , Wei Ye

Graph Convolutional Networks (GCNs) have shown strong performance in learning text representations for various tasks such as text classification, due to its expressive power in modeling graph structure data (e.g., a literature citation…

Computation and Language · Computer Science 2023-05-12 Zhibin Lu , Qianqian Xie , Benyou Wang , Jian-yun Nie

The most prevalent class of neural networks operating on graphs are message passing neural networks (MPNNs), in which the representation of a node is updated iteratively by aggregating information in the 1-hop neighborhood. Since this…

Machine Learning · Computer Science 2023-10-25 Floor Eijkelboom , Erik Bekkers , Michael Bronstein , Francesco Di Giovanni

Semi-supervised learning on graphs is a widely applicable problem in network science and machine learning. Two standard algorithms -- label propagation and graph neural networks -- both operate by repeatedly passing information along edges,…

Machine Learning · Computer Science 2021-02-02 Junteng Jia , Austin R. Benson

Point cloud segmentation is the foundation of 3D environmental perception for modern intelligent systems. To solve this problem and image segmentation, conditional random fields (CRFs) are usually formulated as discrete models in label…

Computer Vision and Pattern Recognition · Computer Science 2021-10-13 Fei Yang , Franck Davoine , Huan Wang , Zhong Jin

Conversational machine comprehension (MC) has proven significantly more challenging compared to traditional MC since it requires better utilization of conversation history. However, most existing approaches do not effectively capture…

Computation and Language · Computer Science 2020-07-16 Yu Chen , Lingfei Wu , Mohammed J. Zaki

The Recommender system is a vital information service on today's Internet. Recently, graph neural networks have emerged as the leading approach for recommender systems. We try to review recent literature on graph neural network-based…

Information Retrieval · Computer Science 2023-11-14 Haojun Zhu , Vikram Kapoor , Priya Sharma

Cross-platform account matching plays a significant role in social network analytics, and is beneficial for a wide range of applications. However, existing methods either heavily rely on high-quality user generated content (including user…

Social and Information Networks · Computer Science 2020-06-04 Hongxu Chen , Hongzhi Yin , Xiangguo Sun , Tong Chen , Bogdan Gabrys , Katarzyna Musial

Various Graph Neural Networks (GNNs) have been successful in analyzing data in non-Euclidean spaces, however, they have limitations such as oversmoothing, i.e., information becomes excessively averaged as the number of hidden layers…

Machine Learning · Computer Science 2024-01-23 Jaeyoon Sim , Sooyeon Jeon , InJun Choi , Guorong Wu , Won Hwa Kim

Graph Neural Networks (GNNs) have shown great ability in modeling graph-structured data for various domains. However, GNNs are known as black-box models that lack interpretability. Without understanding their inner working, we cannot fully…

Machine Learning · Computer Science 2022-10-06 Enyan Dai , Suhang Wang

Graph Convolution Network (GCN) has been widely applied in recommender systems for its representation learning capability on user and item embeddings. However, GCN is vulnerable to noisy and incomplete graphs, which are common in real…

Information Retrieval · Computer Science 2023-05-16 Yaxing Fang , Pengpeng Zhao , Guanfeng Liu , Yanchi Liu , Victor S. Sheng , Lei Zhao , Xiaofang Zhou

Recently the Transformer structure has shown good performances in graph learning tasks. However, these Transformer models directly work on graph nodes and may have difficulties learning high-level information. Inspired by the vision…

Machine Learning · Computer Science 2023-04-11 Han Gao , Xu Han , Jiaoyang Huang , Jian-Xun Wang , Li-Ping Liu