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Neural ranking has become a cornerstone of modern information retrieval. While single vector search remains the dominant paradigm, it suffers from the shortcoming of compressing all the information into a single vector. This compression…
The ability to interpret machine learning model decisions is critical in such domains as healthcare, where trust in model predictions is as important as their accuracy. Inspired by the development of prototype parts-based deep neural…
Recent years have witnessed increasing interests in prompt-based learning in which models can be trained on only a few annotated instances, making them suitable in low-resource settings. When using prompt-based learning for text…
Contrastive learning has been used to learn a high-quality representation of the image in computer vision. However, contrastive learning is not widely utilized in natural language processing due to the lack of a general method of data…
While question-like queries are gaining popularity and search engines' users increasingly adopt them, keyphrase search has traditionally been the cornerstone of web search. This query type is also prevalent in specialised search tasks such…
Inferring latent interaction structures from observed dynamics is a fundamental inverse problem in many-body interacting systems. Most neural approaches rely on black-box surrogates over trainable graphs, achieving accuracy at the expense…
Biomedical research is growing at such an exponential pace that scientists, researchers, and practitioners are no more able to cope with the amount of published literature in the domain. The knowledge presented in the literature needs to be…
Since early machine learning models, metrics such as accuracy and precision have been the de facto way to evaluate and compare trained models. However, a single metric number doesn't fully capture the similarities and differences between…
Establishing retrieval-based dialogue systems that can select appropriate responses from the pre-built index has gained increasing attention from researchers. For this task, the adoption of pre-trained language models (such as BERT) has led…
Large Language Models (LLMs) are intended to reflect human linguistic competencies. But humans have access to a broad and embodied context, which is key in detecting and resolving linguistic ambiguities, even in isolated text spans. A…
Latent class models have wide applications in social and biological sciences. In many applications, pre-specified restrictions are imposed on the parameter space of latent class models, through a design matrix, to reflect practitioners'…
One of the most remarkable properties of word embeddings is the fact that they capture certain types of semantic and syntactic relationships. Recently, pre-trained language models such as BERT have achieved groundbreaking results across a…
Medical image classification is a critical problem for healthcare, with the potential to alleviate the workload of doctors and facilitate diagnoses of patients. However, two challenges arise when deploying deep learning models to real-world…
Processing information locked within clinical health records is a challenging task that remains an active area of research in biomedical NLP. In this work, we evaluate a broad set of machine learning techniques ranging from simple RNNs to…
We introduce Clinical ModernBERT, a transformer based encoder pretrained on large scale biomedical literature, clinical notes, and medical ontologies, incorporating PubMed abstracts, MIMIC IV clinical data, and medical codes with their…
Understanding patient feedback is crucial for improving healthcare services, yet analyzing unlabeled short-text feedback presents challenges due to limited data and domain-specific nuances. Traditional supervised approaches require…
Pretrained contextualized language models such as BERT have achieved impressive results on various natural language processing benchmarks. Benefiting from multiple pretraining tasks and large scale training corpora, pretrained models can…
Retrieval-augmented generation has proven practical when models require specialized knowledge or access to the latest data. However, existing methods for multimodal document retrieval often replicate techniques developed for text-only…
Contextual word embedding models such as ELMo (Peters et al., 2018) and BERT (Devlin et al., 2018) have dramatically improved performance for many natural language processing (NLP) tasks in recent months. However, these models have been…
Large language models (LLMs) are increasingly used to meet user information needs, but their effectiveness in dealing with user queries that contain various types of ambiguity remains unknown, ultimately risking user trust and satisfaction.…