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Source-sink systems are metapopulations of patches that can be of variable habitat quality. They can be seen as graphs, where vertices represent the patches, and the weighted oriented edges give the probability of dispersal from one patch…

Probability · Mathematics 2011-11-11 Vincent Bansaye , Amaury Lambert

Can one hear the 'sound' of a growing network? We address the problem of recognizing the topology of evolving biological or social networks. Starting from percolation theory, we analytically prove a linear inverse relationship between two…

Quantitative Methods · Quantitative Biology 2014-04-10 Ashish Bhan , Animesh Ray

When two (possibly different in distribution) continuous-state branching processes with immigration are present, we study the relative frequency of one of them when the total mass is forced to be constant at a dense set of times. This leads…

Probability · Mathematics 2023-03-14 María Emilia Caballero , Adrián González Casanova , José-Luis Pérez

We give a proof of a result on the growth of the number of particles along chosen paths in a branching Brownian motion. The work follows the approach of classical large deviations results, in which paths in $C[0,1]$ are rescaled onto…

Probability · Mathematics 2010-04-22 Simon Harris , Matthew Roberts

A growing random graph is constructed by successively sampling without replacement an element from the pool of virtual vertices and edges. At start of the process the pool contains $N$ virtual vertices and no edges. Each time a vertex is…

Probability · Mathematics 2024-02-29 Michael Farber , Alexander Gnedin , Wajid Mannan

We consider a discrete-time stochastic growth model on the $d$-dimensional lattice with non-negative real numbers as possible values per site. The growth model describes various interesting examples such as oriented site/bond percolation,…

Probability · Mathematics 2009-12-07 Nobuo Yoshida

We propose a general class of co-evolving tree network models driven by local exploration where new vertices attach to the current network via randomly sampling a vertex and then exploring the graph for a random number of steps in the…

Probability · Mathematics 2024-03-05 Sayan Banerjee , Shankar Bhamidi , Xiangying Huang

We consider a branching random walk on the lattice, where the branching rates are given by an i.i.d. Pareto random potential. We describe the process, including a detailed shape theorem, in terms of a system of growing lilypads. As an…

Probability · Mathematics 2016-06-07 Marcel Ortgiese , Matthew I. Roberts

Performance of standard processes over large distributed networks typically scales with the size of the network. For example, in planar topologies where nodes communicate with their natural neighbors, the scaling factor is $O(n)$, where $n$…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-02-18 Abhinav Mishra

Phylogenetic networks generalize phylogenetic trees by allowing the modelization of events of reticulate evolution. Among the different kinds of phylogenetic networks that have been proposed in the literature, the subclass of binary…

Data Structures and Algorithms · Computer Science 2020-07-01 Gabriel Cardona , Joan Carles Pons , Celine Scornavacca

We show that the protein-protein interaction networks can be surprisingly well described by a very simple evolution model of duplication and divergence. The model exhibits a remarkably rich behavior depending on a single parameter, the…

Molecular Networks · Quantitative Biology 2009-11-10 I. Ispolatov , P. L. Krapivsky , A. Yuryev

The results of training a neural network are heavily dependent on the architecture chosen; and even a modification of only its size, however small, typically involves restarting the training process. In contrast to this, we begin training…

Machine Learning · Computer Science 2024-02-12 Rupert Mitchell , Robin Menzenbach , Kristian Kersting , Martin Mundt

We consider a class of density-dependent branching processes which generalises exponential, logistic and Gompertz growth. A population begins with a single individual, grows exponentially initially, and then growth may slow down as the…

Probability · Mathematics 2022-04-11 David Cheek

In this note we make some specific observations on the distribution of the degree of a given vertex in certain model of randomly growing networks. The rule for network growth is the following. Starting with an initial graph of minimum…

Combinatorics · Mathematics 2014-01-07 Linda Farczadi , Nicholas Wormald

Branch-and-bound is a typical way to solve combinatorial optimization problems. This paper proposes a graph pointer network model for learning the variable selection policy in the branch-and-bound. We extract the graph features, global…

Machine Learning · Computer Science 2023-07-06 Rui Wang , Zhiming Zhou , Tao Zhang , Ling Wang , Xin Xu , Xiangke Liao , Kaiwen Li

Kernel and linear regression have been recently explored in the prediction of graph signals as the output, given arbitrary input signals that are agnostic to the graph. In many real-world problems, the graph expands over time as new nodes…

Machine Learning · Computer Science 2019-11-27 Arun Venkitaraman , Saikat Chatterjee , Bo Wahlberg

Three models of growing random networks with fitness dependent growth rates are analysed using the rate equations for the distribution of their connectivities. In the first model (A), a network is built by connecting incoming nodes to nodes…

Statistical Mechanics · Physics 2009-11-07 G. Ergun , G. J. Rodgers

We discuss the problem of embedding graphs in the plane with restrictions on the vertex mapping. In particular, we introduce a technique for drawing planar graphs with a fixed vertex mapping that bounds the number of times edges bend. An…

Computational Geometry · Computer Science 2012-06-05 Taylor Gordon

We model the growth of a cell population using a piecewise deterministic Markov branching tree. In this model, each cell splits into two offspring at a division rate $B(x)$, which depends on its size $x$. The size of each cell increases…

Probability · Mathematics 2024-09-06 Nathalie Krell

This paper considers one of the fundamental parallel-in-time methods for the solution of ordinary differential equations, Parareal, and extends it by adopting a neural network as a coarse propagator. We provide a theoretical analysis of the…

Numerical Analysis · Mathematics 2024-08-20 Marta M. Betcke , Lisa Maria Kreusser , Davide Murari