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Recent advances in large language models (LLMs) have shown great potential to accelerate drug discovery. However, the specialized nature of biochemical data often necessitates costly domain-specific fine-tuning, posing major challenges.…

Machine Learning · Computer Science 2025-11-17 Namkyeong Lee , Edward De Brouwer , Ehsan Hajiramezanali , Tommaso Biancalani , Chanyoung Park , Gabriele Scalia

Understanding information-dense documents like recipes and scientific papers requires readers to find, interpret, and connect details scattered across text, figures, tables, and other visual elements. These documents are often long and…

Human-Computer Interaction · Computer Science 2026-02-20 Alyssa Hwang , Hita Kambhamettu , Yue Yang , Ajay Patel , Joseph Chee Chang , Andrew Head

Current AI-assisted innovation systems typically apply a single ideation methodology (such as TRIZ or Design Thinking) using sequential prompt-based workflows that do not preserve intermediate reasoning structure. As a result, insights…

Artificial Intelligence · Computer Science 2026-05-14 Joy Bose

While "Intent-oriented programming" (or "Vibe Coding") redefines software engineering, existing code agents remain tethered to static code snapshots. Consequently, they struggle to model the critical information embedded in the temporal…

Machine Learning · Computer Science 2026-03-17 Yi-Xuan Deng , Xiaoqin Liu , Yi Zhang , Guo-Wei Yang , Shuojin Yang

With the continuous development of generative AI's logical reasoning abilities, AI's growing code-generation potential poses challenges for both technical and creative professionals. But how can these advances be directed toward empowering…

Human-Computer Interaction · Computer Science 2025-08-12 Zijian Ding , Qinshi Zhang , Mohan Chi , Ziyi Wang

Recent large language models (LLMs) have demonstrated strong capabilities in understanding and generating code, from competitive programming to repository-level software engineering. In emerging agentic systems, code is no longer only a…

Recent advancements in code-fluent Large Language Models (LLMs) enabled the research on repository-level code editing. In such tasks, the model navigates and modifies the entire codebase of a project according to request. Hence, such tasks…

Software Engineering · Computer Science 2024-06-10 Alexander Kovrigin , Aleksandra Eliseeva , Yaroslav Zharov , Timofey Bryksin

The success of research institutions heavily relies upon identifying the right researchers "for the job": researchers may need to identify appropriate collaborators, often from across disciplines; students may need to identify suitable…

Computation and Language · Computer Science 2021-06-01 Oana Cocarascu , Andrew McLean , Paul French , Francesca Toni

Code-generating large language models translate natural language into code. However, only a small portion of the infinite space of naturalistic utterances is effective at guiding code generation. For non-expert end-user programmers,…

Human-Computer Interaction · Computer Science 2023-04-14 Michael Xieyang Liu , Advait Sarkar , Carina Negreanu , Ben Zorn , Jack Williams , Neil Toronto , Andrew D. Gordon

Foundation models have reshaped AI by unifying fragmented architectures into scalable backbones with multimodal reasoning and contextual adaptation. In parallel, the long-standing notion of AI agents, defined by the sensing-decision-action…

Machine Learning · Computer Science 2025-10-02 Sicong Liu , Weiye Wu , Xiangrui Xu , Teng Li , Bowen Pang , Bin Guo , Zhiwen Yu

Large Language Model (LLM)-based coding agents have shown promising results on coding benchmarks, but their effectiveness on systems code remains underexplored. Due to the size and complexities of systems code, making changes to a systems…

Software Engineering · Computer Science 2026-05-21 Ramneet Singh , Sathvik Joel , Abhav Mehrotra , Nalin Wadhwa , Ramakrishna B Bairi , Aditya Kanade , Nagarajan Natarajan

Large Language Models (LLMs) have extended their impact beyond Natural Language Processing, substantially fostering the development of interdisciplinary research. Recently, various LLM-based agents have been developed to assist scientific…

The exponential growth of scientific knowledge has created significant barriers to cross-disciplinary knowledge discovery, synthesis and research collaboration. In response to this challenge, we present BioSage, a novel compound AI…

With the advancement of web techniques, they have significantly revolutionized various aspects of people's lives. Despite the importance of the web, many tasks performed on it are repetitive and time-consuming, negatively impacting overall…

Artificial Intelligence · Computer Science 2025-08-06 Liangbo Ning , Ziran Liang , Zhuohang Jiang , Haohao Qu , Yujuan Ding , Wenqi Fan , Xiao-yong Wei , Shanru Lin , Hui Liu , Philip S. Yu , Qing Li

Large language model (LLM) based coding agents increasingly act as autonomous contributors that generate and merge pull requests, yet their real-world effects on software projects are unclear-especially compared with widely adopted…

Software Engineering · Computer Science 2026-01-28 Shyam Agarwal , Hao He , Bogdan Vasilescu

Pre-trained on massive amounts of code and text data, large language models (LLMs) have demonstrated remarkable achievements in performing code generation tasks. With additional execution-based feedback, these models can act as agents with…

Computation and Language · Computer Science 2024-11-14 Jierui Li , Hung Le , Yingbo Zhou , Caiming Xiong , Silvio Savarese , Doyen Sahoo

We propose a method that allows to develop shared understanding between two agents for the purpose of performing a task that requires cooperation. Our method focuses on efficiently establishing successful task-oriented communication in an…

Artificial Intelligence · Computer Science 2025-10-01 Nikolaos Kondylidis , Ilaria Tiddi , Annette ten Teije

The development of artificial intelligence systems is transitioning from creating static, task-specific models to dynamic, agent-based systems capable of performing well in a wide range of applications. We propose an Interactive Agent…

Agentic coding tools, such as OpenAI Codex, Claude Code, and Cursor, are transforming the software engineering landscape. These AI-powered systems function as autonomous teammates capable of planning and executing complex development tasks.…

Software Engineering · Computer Science 2025-11-10 Kosei Horikawa , Hao Li , Yutaro Kashiwa , Bram Adams , Hajimu Iida , Ahmed E. Hassan

Information retrieval is a cornerstone of modern knowledge acquisition, enabling billions of queries each day across diverse domains. However, traditional keyword-based search engines are increasingly inadequate for handling complex,…