Related papers: DSA-CycleGAN: A Domain Shift Aware CycleGAN for Ro…
Quantifying axon and myelin properties (e.g., axon diameter, myelin thickness, g-ratio) in histology images can provide useful information about microstructural changes caused by neurodegenerative diseases. Automatic tissue segmentation is…
Harvesting dense pixel-level annotations to train deep neural networks for semantic segmentation is extremely expensive and unwieldy at scale. While learning from synthetic data where labels are readily available sounds promising,…
Autonomous vehicles and driving systems use scene parsing as an essential tool to understand the surrounding environment. Panoptic segmentation is a state-of-the-art technique which proves to be pivotal in this use case. Deep learning-based…
Domain variability is a common bottle neck in developing generalisable algorithms for various medical applications. Motivated by the observation that the domain variability of the medical images is to some extent compact, we propose to…
Surgical image segmentation is highly challenging, primarily due to scarcity of annotated data. Generalist prompted segmentation models like the Segment-Anything Model (SAM) can help tackle this task, but because they require image-specific…
In the domain of unsupervised image-to-image transformation using generative transformative models, CycleGAN has become the architecture of choice. One of the primary downsides of this architecture is its relatively slow rate of…
Accurate medical image segmentation is essential for effective diagnosis and treatment planning but is often challenged by domain shifts caused by variations in imaging devices, acquisition conditions, and patient-specific attributes.…
Deep neural networks are typically trained in a single shot for a specific task and data distribution, but in real world settings both the task and the domain of application can change. The problem becomes even more challenging in dense…
Three-dimensional X-ray histology techniques offer a non-invasive alternative to conventional 2D histology, enabling volumetric imaging of biological tissues without the need for physical sectioning or chemical staining. However, the…
Transferring knowledge across different datasets is an important approach to successfully train deep models with a small-scale target dataset or when few labeled instances are available. In this paper, we aim at developing a model that can…
Annotating nuclei in microscopy images for the training of neural networks is a laborious task that requires expert knowledge and suffers from inter- and intra-rater variability, especially in fluorescence microscopy. Generative networks…
Learning from noisy labels is a challenge that arises in many real-world applications where training data can contain incorrect or corrupted labels. When fine-tuning language models with noisy labels, models can easily overfit the label…
With the increase in the availability of speech from varied domains, it is imperative to use such out-of-domain data to improve existing speech systems. Domain adaptation is a prominent pre-processing approach for this. We investigate it…
Domain adaptive semantic segmentation methods commonly utilize stage-wise training, consisting of a warm-up and a self-training stage. However, this popular approach still faces several challenges in each stage: for warm-up, the widely…
Double staining in histopathology, particularly for metaplastic breast cancer, typically employs H&E and P63 dyes. However, P63's tissue damage and high cost necessitate alternative methods. This study introduces xAI-CycleGAN, an advanced…
Stain variability is a pervasive source of distribution shift and potential shortcut learning in renal pathology AI. We ask whether lupus nephritis glomerular lesion classifiers exploit stain as a shortcut, and how to mitigate such bias…
Digitized pathological diagnosis has been in increasing demand recently. It is well known that color information is critical to the automatic and visual analysis of pathological slides. However, the color variations due to various factors…
Computed Tomography (CT) plays a pivotal role in medical diagnosis; however, variability across reconstruction kernels hinders data-driven approaches, such as deep learning models, from achieving reliable and generalized performance. To…
Fully supervised segmentation methods require a large training cohort of already segmented images, providing information at the pixel level of each image. We present a method to automatically segment and model pathologies in medical images,…
Medical data often exhibits distribution shifts, which cause test-time performance degradation for deep learning models trained using standard supervised learning pipelines. This challenge is addressed in the field of Domain Generalization…