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We describe a new algorithm for Gaussian Elimination suitable for general (unsymmetric and possibly singular) sparse matrices, of any entry type, which has a natural parallel and distributed-memory formulation but degrades gracefully to…

Mathematical Software · Computer Science 2012-01-17 Riccardo Murri

Tensor algebra is essential for data-intensive workloads in various computational domains. Computational scientists face a trade-off between the specialization degree provided by dense tensor algebra and the algorithmic efficiency that…

Programming Languages · Computer Science 2022-11-22 Mahdi Ghorbani , Mathieu Huot , Shideh Hashemian , Amir Shaikhha

Generalized sparse matrix-matrix multiplication (or SpGEMM) is a key primitive for many high performance graph algorithms as well as for some linear solvers, such as algebraic multigrid. Here we show that SpGEMM also yields efficient…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-03-19 Aydin Buluc , John Gilbert

This report provides an introduction to algorithms for fundamental linear algebra problems on various parallel computer architectures, with the emphasis on distributed-memory MIMD machines. To illustrate the basic concepts and key issues,…

Data Structures and Algorithms · Computer Science 2015-03-17 Richard P. Brent

Sparse matrix-vector and matrix-matrix multiplication (SpMV and SpMM) are fundamental in both conventional (graph analytics, scientific computing) and emerging (sparse DNN, GNN) domains. Workload-balancing and parallel-reduction are…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-10-15 Guyue Huang , Guohao Dai , Yu Wang , Yufei Ding , Yuan Xie

In complex visual recognition tasks it is typical to adopt multiple descriptors, that describe different aspects of the images, for obtaining an improved recognition performance. Descriptors that have diverse forms can be fused into a…

Computer Vision and Pattern Recognition · Computer Science 2015-06-15 Jayaraman J. Thiagarajan , Karthikeyan Natesan Ramamurthy , Andreas Spanias

Recently, numerous sparse hardware accelerators for Deep Neural Networks (DNNs), Graph Neural Networks (GNNs), and scientific computing applications have been proposed. A common characteristic among all of these accelerators is that they…

Sparse fusion is a compile-time loop transformation and runtime scheduling implemented as a domain-specific code generator. Sparse fusion generates efficient parallel code for the combination of two sparse matrix kernels where at least one…

Programming Languages · Computer Science 2021-11-25 Kazem Cheshmi , Michelle Mills Strout , Maryam Mehri Dehnavi

We present a distributed-memory library for computations with dense structured matrices. A matrix is considered structured if its off-diagonal blocks can be approximated by a rank-deficient matrix with low numerical rank. Here, we use…

Mathematical Software · Computer Science 2015-06-29 François-Henry Rouet , Xiaoye S. Li , Pieter Ghysels , Artem Napov

The increasing importance of multicore processors calls for a reevaluation of established numerical algorithms in view of their ability to profit from this new hardware concept. In order to optimize the existent algorithms, a detailed…

Performance · Computer Science 2012-03-01 Gerald Schubert , Georg Hager , Holger Fehske

Partitioning a graph into blocks of roughly equal weight while cutting only few edges is a fundamental problem in computer science with numerous practical applications. While shared-memory parallel partitioners have recently matured to…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-06-06 Peter Sanders , Daniel Seemaier

Machine learning (ML) models are widely used in many important domains. For efficiently processing these computational- and memory-intensive applications, tensors of these over-parameterized models are compressed by leveraging sparsity,…

Hardware Architecture · Computer Science 2021-08-11 Shail Dave , Riyadh Baghdadi , Tony Nowatzki , Sasikanth Avancha , Aviral Shrivastava , Baoxin Li

In recent years, many accelerators have been proposed to efficiently process sparse tensor algebra applications (e.g., sparse neural networks). However, these proposals are single points in a large and diverse design space. The lack of…

Hardware Architecture · Computer Science 2023-01-11 Yannan Nellie Wu , Po-An Tsai , Angshuman Parashar , Vivienne Sze , Joel S. Emer

We develop and implement in this paper a fast sparse assembly algorithm, the fundamental operation which creates a compressed matrix from raw index data. Since it is often a quite demanding and sometimes critical operation, it is of…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-04-28 Stefan Engblom , Dimitar Lukarski

One of the biggest open problems in computational algebra is the design of efficient algorithms for Gr{\"o}bner basis computations that take into account the sparsity of the input polynomials. We can perform such computations in the case of…

Symbolic Computation · Computer Science 2018-06-22 Matías Bender , Jean-Charles Faugère , Elias Tsigaridas

Sparse coding is a basic task in many fields including signal processing, neuroscience and machine learning where the goal is to learn a basis that enables a sparse representation of a given set of data, if one exists. Its standard…

Machine Learning · Computer Science 2015-03-04 Sanjeev Arora , Rong Ge , Tengyu Ma , Ankur Moitra

Nested parallelism exists in scientific codes that are searching multi-dimensional spaces. However, implementations of nested parallelism often have overhead and load balance issues. The Orbital Analysis code we present exhibits a sparse…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-08-01 Benjamin James Gaska , Neha Jothi , Mahdi Soltan Mohammadi , Kat Volk , Michelle Mills Strout

Tensor decomposition (TD) is an important method for extracting latent information from high-dimensional (multi-modal) sparse data. This study presents a novel framework for accelerating fundamental TD operations on massively parallel GPU…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-06-29 Andy Nguyen , Ahmed E. Helal , Fabio Checconi , Jan Laukemann , Jesmin Jahan Tithi , Yongseok Soh , Teresa Ranadive , Fabrizio Petrini , Jee W. Choi

We introduce an extension to the CLRS algorithmic learning benchmark, prioritizing scalability and the utilization of sparse representations. Many algorithms in CLRS require global memory or information exchange, mirrored in its execution…

Machine Learning · Computer Science 2023-11-21 Julian Minder , Florian Grötschla , Joël Mathys , Roger Wattenhofer

This paper shows how to generate code that efficiently converts sparse tensors between disparate storage formats (data layouts) such as CSR, DIA, ELL, and many others. We decompose sparse tensor conversion into three logical phases:…

Mathematical Software · Computer Science 2020-07-01 Stephen Chou , Fredrik Kjolstad , Saman Amarasinghe