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This study explores the application of deep learning to improve and automate pollen grain detection and classification in both optical and holographic microscopy images, with a particular focus on veterinary cytology use cases. We used…

Computer Vision and Pattern Recognition · Computer Science 2025-12-29 Swarn Singh Warshaneyan , Maksims Ivanovs , Blaž Cugmas , Inese Bērziņa , Laura Goldberga , Mindaugas Tamosiunas , Roberts Kadiķis

We present the first unsupervised deep learning method for pollen analysis using bright-field microscopy. Using a modest dataset of 650 images of pollen grains collected from honey, we achieve family level identification of pollen. We embed…

Computer Vision and Pattern Recognition · Computer Science 2023-03-03 Chloe He , Gerard Glowacki , Alexis Gkantiragas

In the field of transmission electron microscopy, data interpretation often lags behind acquisition methods, as image processing methods often have to be manually tailored to individual datasets. Machine learning offers a promising approach…

Image and Video Processing · Electrical Eng. & Systems 2021-07-07 C. K. Groschner , Christina Choi , M. C. Scott

Counting cells in fluorescent microscopy is a tedious, time-consuming task that researchers have to accomplish to assess the effects of different experimental conditions on biological structures of interest. Although such objects are…

Computer Vision and Pattern Recognition · Computer Science 2021-03-02 R. Morelli , L. Clissa , M. Dalla , M. Luppi , L. Rinaldi , A. Zoccoli

Petrographic analysis based on microfacies identification in thin sections is widely used in sedimentary environment interpretation and paleoecological reconstruction. Fossil recognition from microfacies is an essential procedure for…

Computer Vision and Pattern Recognition · Computer Science 2020-11-05 Xiaokang Liu , Haijun Song

This paper introduces an automated vision system for animal detection in trail-camera images taken from a field under the administration of the Texas Parks and Wildlife Department. As traditional wildlife counting techniques are intrusive…

Computer Vision and Pattern Recognition · Computer Science 2021-03-09 Golnaz Moallem , Don D. Pathirage , Joel Reznick , James Gallagher , Hamed Sari-Sarraf

In precision crop protection, (target-orientated) object detection in image processing can help navigate Unmanned Aerial Vehicles (UAV, crop protection drones) to the right place to apply the pesticide. Unnecessary application of non-target…

Computer Vision and Pattern Recognition · Computer Science 2021-03-09 Zhenwang Qin , Wensheng Wang , Karl-Heinz Dammer , Leifeng Guo , Zhen Cao

Breast density assessment is a crucial component of mammographic interpretation, with high breast density (BI-RADS categories C and D) representing both a significant risk factor for developing breast cancer and a technical challenge for…

Image and Video Processing · Electrical Eng. & Systems 2025-07-11 Peyman Sharifian , Xiaotong Hong , Alireza Karimian , Mehdi Amini , Hossein Arabi

Scanning microscopy systems, such as confocal and multiphoton microscopy, are powerful imaging tools for probing deep into biological tissue. However, scanning systems have an inherent trade-off between acquisition time, field of view,…

Image and Video Processing · Electrical Eng. & Systems 2025-03-25 Cassandra Tong Ye , Jiashu Han , Kunzan Liu , Anastasios Angelopoulos , Linda Griffith , Kristina Monakhova , Sixian You

Polarized light microscopy provides high contrast to birefringent specimen and is widely used as a diagnostic tool in pathology. However, polarization microscopy systems typically operate by analyzing images collected from two or more light…

Automated in-vitro cell detection and counting have been a key theme for artificial and intelligent biological analysis such as biopsy, drug analysis and decease diagnosis. Along with the rapid development of microfluidics and lab-on-chip…

Computer Vision and Pattern Recognition · Computer Science 2020-01-08 Tiancheng Xia , Richard Jiang , YongQing Fu , Nanlin Jin

Manual operation of microscopes for repetitive tasks in cell biology is a significant bottleneck, consuming invaluable expert time, and introducing human error. Automation is essential, and while Digital Holographic Microscopy (DHM) offers…

Aggregation-based assays, using micro- and nano-particles have been widely accepted as an efficient and cost-effective bio-sensing tool, particularly in microbiology, where particle clustering events are used as a metric to infer the…

Instrumentation and Detectors · Physics 2018-12-31 Yichen Wu , Aniruddha Ray , Qingshan Wei , Alborz Feizi , Xin Tong , Eva Chen , Yi Luo , Aydogan Ozcan

Two-dimensional (2D) materials and heterostructures exhibit unique physical properties, necessitating efficient and accurate characterization methods. Leveraging advancements in artificial intelligence, we introduce a deep learning-based…

Machine Learning · Computer Science 2025-03-04 Junqi He , Yujie Zhang , Jialu Wang , Tao Wang , Pan Zhang , Chengjie Cai , Jinxing Yang , Xiao Lin , Xiaohui Yang

Deep learning approaches have shown great success in image classification tasks and can aid greatly towards the fast and reliable classification of pollen grain aerial imagery. However, often-times deep learning methods in the setting of…

Computer Vision and Pattern Recognition · Computer Science 2021-03-01 Jaideep Murkute

Accurate assessment of human epidermal growth factor receptor 2 (HER2) expression is critical for breast cancer diagnosis, prognosis, and therapy selection; yet, most existing digital HER2 scoring methods rely on bulky and expensive optical…

Medical Physics · Physics 2026-01-27 Che-Yung Shen , Xilin Yang , Yuzhu Li , Leon Lenk , Aydogan Ozcan

Automatic bill classification is an attractive task with many potential applications such as automated detection and counting in images or videos. To address this purpose we present a Deep Learning Model to classify Chilean Banknotes,…

Computer Vision and Pattern Recognition · Computer Science 2019-12-30 Daniel San Martin , Daniel Manzano

Agriculture is vital for global food security, but crops are vulnerable to diseases that impact yield and quality. While Convolutional Neural Networks (CNNs) accurately classify plant diseases using leaf images, their high computational…

Computer Vision and Pattern Recognition · Computer Science 2025-06-03 T. Ahmed , S. Jannat , Md. F. Islam , J. Noor

We present a comprehensive study on fully automated pollen recognition across both conventional optical and digital in-line holographic microscopy (DIHM) images of sample slides. Visually recognizing pollen in unreconstructed holographic…

Computer Vision and Pattern Recognition · Computer Science 2025-12-25 Swarn S. Warshaneyan , Maksims Ivanovs , Blaž Cugmas , Inese Bērziņa , Laura Goldberga , Mindaugas Tamosiunas , Roberts Kadiķis

Deep-learning algorithms enable precise image recognition based on high-dimensional hierarchical image features. Here, we report the development and implementation of a deep-learning-based image segmentation algorithm in an autonomous…

Image and Video Processing · Electrical Eng. & Systems 2020-03-26 Satoru Masubuchi , Eisuke Watanabe , Yuta Seo , Shota Okazaki , Takao Sasagawa , Kenji Watanabe , Takashi Taniguchi , Tomoki Machida
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