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Single-cell RNA sequencing (scRNA-seq) is essential for unraveling cellular heterogeneity and diversity, offering invaluable insights for bioinformatics advancements. Despite its potential, traditional clustering methods in scRNA-seq data…

Machine Learning · Computer Science 2025-10-01 Ping Xu , Zhiyuan Ning , Meng Xiao , Guihai Feng , Xin Li , Yuanchun Zhou , Pengfei Wang

Although remarkable progress on the neural table-to-text methods has been made, the generalization issues hinder the applicability of these models due to the limited source tables. Large-scale pretrained language models sound like a…

Computation and Language · Computer Science 2023-01-06 Miao Chen , Xinjiang Lu , Tong Xu , Yanyan Li , Jingbo Zhou , Dejing Dou , Hui Xiong

Generative recommendation systems have gained increasing attention as an innovative approach that directly generates item identifiers for recommendation tasks. Despite their potential, a major challenge is the effective construction of item…

Information Retrieval · Computer Science 2025-06-05 Enze Liu , Bowen Zheng , Cheng Ling , Lantao Hu , Han Li , Wayne Xin Zhao

Single-cell RNA sequencing (scRNA-seq) provides unprecedented insights into cellular heterogeneity, enabling detailed analysis of complex biological systems at single-cell resolution. However, the high dimensionality and technical noise…

Genomics · Quantitative Biology 2025-09-04 Hojjat Torabi Goudarzi , Maziyar Baran Pouyan

Visual tokenization remains a core challenge in unifying visual understanding and generation within the autoregressive paradigm. Existing methods typically employ tokenizers in discrete latent spaces to align with the tokens from large…

Computer Vision and Pattern Recognition · Computer Science 2025-10-09 Ziyuan Huang , DanDan Zheng , Cheng Zou , Rui Liu , Xiaolong Wang , Kaixiang Ji , Weilong Chai , Jianxin Sun , Libin Wang , Yongjie Lv , Taozhi Huang , Jiajia Liu , Qingpei Guo , Ming Yang , Jingdong Chen , Jun Zhou

Generative recommendation has recently emerged as a transformative paradigm that directly generates target items, surpassing traditional cascaded approaches. It typically involves two components: a tokenizer that learns item identifiers and…

Information Retrieval · Computer Science 2026-01-27 Jialei Li , Yang Zhang , Yimeng Bai , Shuai Zhu , Ziqi Xue , Xiaoyan Zhao , Dingxian Wang , Frank Yang , Andrew Rabinovich , Xiangnan He

Achieving visual semantic understanding requires a unified framework that simultaneously handles object detection, category prediction, and attribute recognition. However, current advanced approaches rely on global similarity and struggle…

Computer Vision and Pattern Recognition · Computer Science 2025-11-21 Xinyu Nan , Lingtao Mao , Huangyu Dai , Zexin Zheng , Xinyu Sun , Zihan Liang , Ben Chen , Yuqing Ding , Chenyi Lei , Wenwu Ou , Han Li

The diversity of tables makes table detection a great challenge, leading to existing models becoming more tedious and complex. Despite achieving high performance, they often overfit to the table style in training set, and suffer from…

Computation and Language · Computer Science 2023-12-19 Yang Fan , Xiangping Wu , Qingcai Chen , Heng Li , Yan Huang , Zhixiang Cai , Qitian Wu

Large Language Model-based (LLM-based) Text-to-SQL methods have achieved important progress in generating SQL queries for real-world applications. When confronted with table content-aware questions in real-world scenarios, ambiguous data…

Databases · Computer Science 2025-11-07 Wenbo Xu , Liang Yan , Chuanyi Liu , Peiyi Han , Haifeng Zhu , Yong Xu , Yingwei Liang , Bob Zhang

Despite the impressive progress on understanding and generating images shown by the recent unified architectures, the integration of 3D tasks remains challenging and largely unexplored. In this paper, we introduce UniUGG, the first unified…

Computer Vision and Pattern Recognition · Computer Science 2026-03-10 Yueming Xu , Jiahui Zhang , Ze Huang , Yurui Chen , Yanpeng Zhou , Zhenyu Chen , Yu-Jie Yuan , Pengxiang Xia , Guowei Huang , Xinyue Cai , Zhongang Qi , Xingyue Quan , Jianye Hao , Hang Xu , Li Zhang

In sequence-to-sequence learning, e.g., natural language generation, the decoder relies on the attention mechanism to efficiently extract information from the encoder. While it is common practice to draw information from only the last…

Computation and Language · Computer Science 2022-08-30 Fenglin Liu , Xuancheng Ren , Guangxiang Zhao , Chenyu You , Xuewei Ma , Xian Wu , Xu Sun

The data landscape is rich with structured data, often of high value to organizations, driving important applications in data analysis and machine learning. Recent progress in representation learning and generative models for such data has…

Information Retrieval · Computer Science 2025-05-20 Xingyu Ji , Parker Glenn , Aditya G. Parameswaran , Madelon Hulsebos

Tables condense key transactional and administrative information into compact layouts, but practical extraction requires more than text recognition: systems must also recover structure (rows, columns, merged cells, headers) and interpret…

Computer Vision and Pattern Recognition · Computer Science 2026-04-20 Laziz Hamdi , Amine Tamasna , Thierry Paquet

Despite the suitability of graphs for capturing the relational structures inherent in architectural layout designs, there is a notable dearth of research on interpreting architectural design space using graph-based representation learning…

Machine Learning · Computer Science 2024-06-26 Jielin Chen , Rudi Stouffs

Recent generative approaches for multi-hop question answering (QA) utilize the fusion-in-decoder method~\cite{izacard-grave-2021-leveraging} to generate a single sequence output which includes both a final answer and a reasoning path taken…

Computation and Language · Computer Science 2023-07-04 Gowtham Ramesh , Makesh Sreedhar , Junjie Hu

Recent advancements in large-scale pre-training have shown the potential to learn generalizable representations for downstream tasks. In the graph domain, however, capturing and transferring structural information across different graph…

Machine Learning · Computer Science 2026-02-24 Jialin Chen , Haolan Zuo , Haoyu Peter Wang , Siqi Miao , Pan Li , Rex Ying

Heterogeneous tabular data poses unique challenges in generative modelling due to its fundamentally different underlying data structure compared to homogeneous modalities, such as images and text. Although previous research has sought to…

Machine Learning · Computer Science 2025-03-13 Xiangjian Jiang , Nikola Simidjievski , Mateja Jamnik

Hybrid Question-Answering (HQA), which targets reasoning over tables and passages linked from table cells, has witnessed significant research in recent years. A common challenge in HQA and other passage-table QA datasets is that it is…

Computation and Language · Computer Science 2023-05-25 Jian Wu , Yicheng Xu , Yan Gao , Jian-Guang Lou , Börje F. Karlsson , Manabu Okumura

Latent diffusion models (LDMs) enable high-fidelity synthesis by operating in learned latent spaces. However, training state-of-the-art LDMs requires complex staging: a tokenizer must be trained first, before the diffusion model can be…

Computer Vision and Pattern Recognition · Computer Science 2026-03-24 Shivam Duggal , Xingjian Bai , Zongze Wu , Richard Zhang , Eli Shechtman , Antonio Torralba , Phillip Isola , William T. Freeman

Visual generative models based on latent space have achieved great success, underscoring the significance of visual tokenization. Mapping images to latents boosts efficiency and enables multimodal alignment for scaling up in downstream…

Computer Vision and Pattern Recognition · Computer Science 2026-03-18 Yunpeng Qu , Kaidong Zhang , Yukang Ding , Ying Chen , Jian Wang
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