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Voronoi tessellations have been used to model the geometric arrangement of cells in morphogenetic or cancerous tissues, however so far only with flat hypersurfaces as cell-cell contact borders. In order to reproduce the experimentally…

Biological Physics · Physics 2009-12-02 Martin Bock , Amit Kumar Tyagi , Jan-Ulrich Kreft , Wolfgang Alt

Navigating topological transitions in cellular mechanical systems is a significant challenge for existing simulation methods. While abstract models lack predictive capabilities at the cellular level, explicit network representations…

Graphics · Computer Science 2024-04-30 Logan Numerow , Yue Li , Stelian Coros , Bernhard Thomaszewski

In this paper, the Discontinuous Cell Method (DCM) is formulated with the objective of simulating cohesive fracture propagation and fragmentation in homogeneous solids without issues relevant to excessive mesh deformation typical of…

Numerical Analysis · Mathematics 2016-08-25 Gianluca Cusatis , Roozbeh Rezakhani , Edward A. Schauffert

The Voronoi-based cellular model is highly successful in describing the motion of two-dimensional confluent cell tissues. In the homogeneous version of this model, the energy of each cell is determined solely by its geometric shape and…

Cell Behavior · Quantitative Biology 2018-11-07 Eial Teomy , David A. Kessler , Herbert Levine

An important open question in the modeling of biological tissues is how to identify the right scale for coarse-graining, or equivalently, the right number of degrees of freedom. For confluent biological tissues, both vertex and Voronoi…

Tissues and Organs · Quantitative Biology 2023-06-08 Elizabeth Lawson-Keister , Tao Zhang , M. Lisa Manning

We consider problem of constructing purely Voronoi mesh where the union of uncut Voronoi cells approximates the planar computational domain with piecewise-smooth boundary. Smooth boundary fragments are approximated by the Voronoi edges and…

Numerical Analysis · Mathematics 2018-09-17 V. A. Garanzha , L. N. Kudryavtseva , V. O. Tsvetkova

The dynamics of glassy materials slows down upon cooling, typically showing either Arrhenius or super-Arrhenius behavior. However, it was recently shown that 2D cell-based models for biological tissues can be continuously tuned between…

Soft Condensed Matter · Physics 2026-03-26 Chengling Li , Matthias Merkel , Daniel M. Sussman

We study the problem of decomposing a volume bounded by a smooth surface into a collection of Voronoi cells. Unlike the dual problem of conforming Delaunay meshing, a principled solution to this problem for generic smooth surfaces remained…

Unlike other schemes that locally violate the essential stability properties of the analytic parabolic and elliptic problems, Voronoi finite volume methods (FVM) and boundary conforming Delaunay meshes provide good approximation of the…

Numerical Analysis · Mathematics 2020-02-20 Klaus Gärtner , Lennard Kamenski

Voronoi diagrams appear in many areas in science and technology and have numerous applications. They have been the subject of extensive investigation during the last decades. Roughly speaking, they are a certain decomposition of a given…

Computational Geometry · Computer Science 2015-03-19 Daniel Reem

Computational technologies for the approximate solution of multidimensional boundary value problems often rely on irregular computational meshes and finite-volume approximations. In this framework, the discrete problem represents the…

Numerical Analysis · Mathematics 2025-09-03 M. M. Chernyshov , P. N. Vabishchevich

Tuning cell rearrangements is essential in collective cell movement that underlies cancer progression, wound repair, and embryonic development. A key question is how tissue material properties and morphology emerge from cellular factors…

Biological Physics · Physics 2025-07-15 Soumyadipta Ray , Santidan Biswas , Dipjyoti Das

We use a simple fragmentation model to describe the statistical behavior of the Voronoi cell patterns generated by a set of points in 1D and in 2D. In particular, we are interested in the distribution of sizes of these Voronoi cells. Our…

Statistical Mechanics · Physics 2011-11-30 Diego Luis Gonzalez Cabrera , T. L. Einstein

Vertex models are a popular approach to modeling the mechanical and dynamical properties of dense biological tissues, describing the tissue as a network of connected polygons representing the cells. Recently a class of two-dimensional…

Soft Condensed Matter · Physics 2017-08-14 Daniel M. Sussman , Matthias Merkel

Real complex networks are often characterized by spatial constraints such as the relative position and adjacency of nodes. The present work describes how Voronoi tessellations of the space where the network is embedded provide not only a…

Condensed Matter · Physics 2009-11-10 Luciano da Fontoura Costa

Many methods for modelling spatial processes assume global smoothness properties; such assumptions are often violated in practice. We introduce a method for modelling spatial processes that display heterogeneity or contain discontinuities.…

The Voronoi model is a popular tool for studying confluent living tissues. It exhibits an anomalous glassy behavior even at very low temperatures or weak active self-propulsion, and at zero temperature the model exhibits a disordered solid…

Soft Condensed Matter · Physics 2021-09-30 D. E. P. Pinto , D. M. Sussman , M. M. Telo da Gama , N. A. M. Araujo

We consider the Voronoi diagram generated by $n$ i.i.d. $\mathbb{R}^{d}$-valued random variables with an arbitrary underlying probability density function $f$ on $\mathbb{R}^{d}$, and analyse the asymptotic behaviours of certain geometric…

Probability · Mathematics 2019-01-03 Isaac Gibbs , Linan Chen

Epithelia are confluent cell layers that self-organize into polygonal networks whose geometry encodes their mechanical state. A principal driver is the tunable contractility of the actomyosin cortex, which links cell-junction tension to…

Soft Condensed Matter · Physics 2025-12-16 Sulaimaan Lim , Julien Vermot , Chiu Fan Lee

Multicellular rosettes are observed in different situations such as morphogenesis, wound healing, and cancer progression. While some molecular insights have been gained to explain the presence of these assemblies of five or more cells…

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