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Graph-structured data are ubiquitous. However, graphs encode diverse types of information and thus play different roles in data representation. In this paper, we distinguish the \textit{representational} and the \textit{correlational} roles…

Machine Learning · Computer Science 2021-03-22 Jiaqi Ma , Bo Chang , Xuefei Zhang , Qiaozhu Mei

Neurons are the fundamental building blocks of deep neural networks, and their interconnections allow AI to achieve unprecedented results. Motivated by the goal of understanding how neurons encode information, compositional explanations…

Computer Vision and Pattern Recognition · Computer Science 2025-11-27 Biagio La Rosa , Leilani H. Gilpin

The Recurrent Neural Networks and their variants have shown promising performances in sequence modeling tasks such as Natural Language Processing. These models, however, turn out to be impractical and difficult to train when exposed to very…

Computer Vision and Pattern Recognition · Computer Science 2017-07-07 Yinchong Yang , Denis Krompass , Volker Tresp

It has been hypothesized that some form of "modular" structure in artificial neural networks should be useful for learning, compositionality, and generalization. However, defining and quantifying modularity remains an open problem. We cast…

Machine Learning · Computer Science 2022-06-23 Richard D. Lange , David S. Rolnick , Konrad P. Kording

A tensor network is a type of decomposition used to express and approximate large arrays of data. A given data-set, quantum state or higher dimensional multi-linear map is factored and approximated by a composition of smaller multi-linear…

Quantum Physics · Physics 2022-07-08 Richik Sengupta , Soumik Adhikary , Ivan Oseledets , Jacob Biamonte

Tree-structured neural networks have proven to be effective in learning semantic representations by exploiting syntactic information. In spite of their success, most existing models suffer from the underfitting problem: they recursively use…

Computation and Language · Computer Science 2017-05-12 Pengfei Liu , Xipeng Qiu , Xuanjing Huang

Due to the lack of a method to efficiently represent the multimodal information of a protein, including its structure and sequence information, predicting compound-protein binding affinity (CPA) still suffers from low accuracy when applying…

Biomolecules · Quantitative Biology 2022-11-28 Binjie Guo , Hanyu Zheng , Haohan Jiang , Xiaodan Li , Naiyu Guan , Yanming Zuo , Yicheng Zhang , Hengfu Yang , Xuhua Wang

The paper introduces an extension of the proposal according to which conceptual representations in cognitive agents should be intended as heterogeneous proxytypes. The main contribution of this paper is in that it details how to reconcile,…

Artificial Intelligence · Computer Science 2019-09-05 Antonio Lieto

Deep learning techniques are increasingly being adopted for classification tasks over the past decade, yet explaining how deep learning architectures can achieve state-of-the-art performance is still an elusive goal. While all the training…

Machine Learning · Computer Science 2021-10-12 Sakib Mostafa , Debajyoti Mondal

The problem of explaining the results produced by machine learning methods continues to attract attention. Neural network (NN) models, along with gradient boosting machines, are expected to be utilized even in tabular data with high…

Machine Learning · Computer Science 2025-12-29 Takashi Isozaki , Masahiro Yamamoto , Atsushi Noda

Recent work by Hewitt et al. (2020) provides an interpretation of the empirical success of recurrent neural networks (RNNs) as language models (LMs). It shows that RNNs can efficiently represent bounded hierarchical structures that are…

Computation and Language · Computer Science 2024-06-19 Anej Svete , Robin Shing Moon Chan , Ryan Cotterell

With the growth of deep learning, how to describe deep neural networks unifiedly is becoming an important issue. We first formalize neural networks mathematically with their directed graph representations, and prove a generation theorem…

Machine Learning · Computer Science 2018-05-11 Yujian Li , Chuanhui Shan

We present a new distributed representation in deep neural nets wherein the information is represented in native form as a matrix. This differs from current neural architectures that rely on vector representations. We consider matrices as…

Machine Learning · Computer Science 2018-02-06 Kien Do , Truyen Tran , Svetha Venkatesh

This work investigates the framework and performance issues of the composite neural network, which is composed of a collection of pre-trained and non-instantiated neural network models connected as a rooted directed acyclic graph for…

Machine Learning · Computer Science 2021-07-20 Ming-Chuan Yang , Meng Chang Chen

Modelling across engineering, systems science, and formal methods remains limited by binary relations, implicit semantics, and diagram-centred notations that obscure multilevel structure and hinder mechanisation. Hypernetwork Theory (HT)…

Logic in Computer Science · Computer Science 2025-12-04 Richard D. Charlesworth

Recent efforts have shown machine learning to be useful for the prediction of nonlinear fluid dynamics. Predictive accuracy is often a central motivation for employing neural networks, but the pattern recognition central to the network…

Fluid Dynamics · Physics 2022-08-23 Shizheng Wen , Michael W. Lee , Kai M. Kruger Bastos , Earl H. Dowell

The transparency of deep learning models is essential for clinical diagnostics. Concept Bottleneck Model provides clear decision-making processes for diagnosis by transforming the latent space of black-box models into human-understandable…

Computer Vision and Pattern Recognition · Computer Science 2025-10-07 Yiheng Dong , Yi Lin , Xin Yang

Ongoing efforts to understand deep neural networks (DNN) have provided many insights, but DNNs remain incompletely understood. Improving DNN's interpretability has practical benefits, such as more accountable usage, better algorithm…

Machine Learning · Computer Science 2021-02-09 Erico Tjoa , Guan Cuntai

Graph Neural Networks (GNNs) are able to achieve high classification accuracy on many important real world datasets, but provide no rigorous notion of predictive uncertainty. Quantifying the confidence of GNN models is difficult due to the…

Machine Learning · Statistics 2024-01-10 Jase Clarkson

How can we discover and succinctly summarize the concepts that a neural network has learned? Such a task is of great importance in applications of networks in areas of inference that involve classification, like medical diagnosis based on…

Machine Learning · Computer Science 2020-12-24 Uday Singh Saini , Evangelos E. Papalexakis