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Working memory is a cognitive function involving the storage and manipulation of latent information over brief intervals of time, thus making it crucial for context-dependent computation. Here, we use a top-down modeling approach to examine…

Neurons and Cognition · Quantitative Biology 2021-11-17 Elham Ghazizadeh , ShiNung Ching

This paper introduces a biomathematical model designed to describe the internal dynamics of dream formation and spontaneous cognitive processes. The model incorporates neurocognitive factors such as dissatisfaction, acceptance, forgetting,…

Neurons and Cognition · Quantitative Biology 2025-05-12 Shirmohammad Tavangari , Sajjad Janfaza , Zahra Shakarami , Aref Yelghi

Humans and other organisms make decisions choosing between different options, with the aim to maximize the reward and minimize the cost. The main theoretical framework for modeling the decision-making process has been based on the highly…

Neurons and Cognition · Quantitative Biology 2024-11-19 Olga Tapinova , Tal Finkelman , Tamar Reitich-Stolero , Rony Paz , Assaf Tal , Nir S. Gov

Conservation of energy is at the core of many physical phenomena and dynamical systems. There have been a significant number of works in the past few years aimed at predicting the trajectory of motion of dynamical systems using neural…

Machine Learning · Computer Science 2022-08-05 Yi Heng Lim , Muhammad Firmansyah Kasim

We begin by demonstrating that the neuronal state equation from Dynamic Causal Modelling takes on the form of the discretized Fokker-Planck equation upon the inclusion of local activity gradients within a network. Using the Jacobian of this…

Quantitative Methods · Quantitative Biology 2019-11-27 Erik D. Fagerholm , Rosalyn J. Moran , Robert Leech

In this paper, we consider stable stochastic linear systems modeling whole-brain resting-state dynamics. We parametrize the state matrix of the system (effective connectivity) in terms of its steady-state covariance matrix (functional…

Systems and Control · Electrical Eng. & Systems 2023-10-12 Umberto Casti , Giacomo Baggio , Danilo Benozzo , Sandro Zampieri , Alessandra Bertoldo , Alessandro Chiuso

Motion perception is a critical capability determining a variety of aspects of insects' life, including avoiding predators, foraging and so forth. A good number of motion detectors have been identified in the insects' visual pathways.…

Computer Vision and Pattern Recognition · Computer Science 2019-04-04 Qinbing Fu , Hongxin Wang , Cheng Hu , Shigang Yue

Anatomic connections between brain areas affect information flow between neuronal circuits and the synchronization of neuronal activity. However, such structural connectivity does not coincide with effective connectivity, related to the…

Neurons and Cognition · Quantitative Biology 2015-06-03 Demian Battaglia , Annette Witt , Fred Wolf , Theo Geisel

Recurrent neural networks (RNNs) provide a theoretical framework for understanding computation in biological neural circuits, yet classical results, such as Hopfield's model of associative memory, rely on symmetric connectivity that…

Disordered Systems and Neural Networks · Physics 2026-02-17 Ramón Nartallo-Kaluarachchi , Renaud Lambiotte , Alain Goriely

We study molecular dynamics within populations of diffusively coupled cells under the assumption of fast diffusive exchange. As a technical tool, we propose conditions on boundedness and ultimate boundedness for systems with a singular…

Cell Behavior · Quantitative Biology 2012-12-19 Steffen Waldherr , Frank Allgöwer

Additive noise is known to produce counter-intuitive behaviors in nonlinear dynamical systems. Previously, it was shown that systems with a deterministic limit cycle can display bistable switching between metastable states in the presence…

Chaotic Dynamics · Physics 2015-01-26 Michael A. Schwemmer , Jay M. Newby

The aerial flocking of birds, or murmurations, has fascinated observers while presenting many challenges to behavioral study and simulation. We examine how the periphery of murmurations remain well bounded and cohesive. We also investigate…

Quantitative Methods · Quantitative Biology 2024-07-22 Rama Carl Hoetzlein

We investigate the complex spatiotemporal dynamics of an ecological network with species dispersal mediated via a mean-field coupling. The local dynamics of the network are governed by the Truscott--Brindley model, which is an important…

Adaptation and Self-Organizing Systems · Physics 2017-09-13 Ramesh Arumugam , Tanmoy Banerjee , Partha Sharathi Dutta

Modern deep neural networks increasingly make use of features such as dynamic control flow, data structures and dynamic tensor shapes. Existing deep learning systems focus on optimizing and executing static neural networks which assume a…

Programming Languages · Computer Science 2021-03-15 Haichen Shen , Jared Roesch , Zhi Chen , Wei Chen , Yong Wu , Mu Li , Vin Sharma , Zachary Tatlock , Yida Wang

Despite their outstanding performance in a broad spectrum of real-world tasks, deep artificial neural networks are sensitive to input noises, particularly adversarial perturbations. On the contrary, human and animal brains are much less…

Neural and Evolutionary Computing · Computer Science 2022-05-23 Xiyuan Chen , Xingyu Li , Yi Zhou , Tianming Yang

In this study, we propose a novel data-driven reduced-order model for complex dynamics, including nonlinear, multi-attractor, multi-frequency, and multiscale behaviours. The starting point is a fully automatable cluster-based network model…

Fluid Dynamics · Physics 2024-03-04 Chang Hou , Nan Deng , Bernd R. Noack

Neural circuits in the brain perform a variety of essential functions, including input classification, pattern completion, and the generation of rhythms and oscillations that support processes such as breathing and locomotion. There is also…

Neurons and Cognition · Quantitative Biology 2024-10-16 Juliana Londono Alvarez

We use analytical techniques based on an expansion in the inverse system size to study the stochastic evolutionary dynamics of finite populations of players interacting in a repeated prisoner's dilemma game. We show that a mechanism of…

Populations and Evolution · Quantitative Biology 2012-04-20 Alex J. Bladon , Tobias Galla , Alan J. McKane

Statistical node clustering in discrete time dynamic networks is an emerging field that raises many challenges. Here, we explore statistical properties and frequentist inference in a model that combines a stochastic block model (SBM) for…

Methodology · Statistics 2016-06-23 Catherine Matias , Vincent Miele

The activity patterns of highly developed cognitive systems like the human brain are dominated by autonomous dynamical processes, that is by a self-sustained activity which would be present even in the absence of external sensory stimuli.…

Neurons and Cognition · Quantitative Biology 2008-04-14 Claudius Gros , Gregor Kaczor