English
Related papers

Related papers: Counterfactual Peptide Editing for Causal TCR--pMH…

200 papers

Online anomaly detection is essential in fields such as cybersecurity, healthcare, and industrial monitoring, where promptly identifying deviations from expected behavior can avert critical failures or security breaches. While numerous…

Machine Learning · Computer Science 2025-05-06 Amirmohammad Farzaneh , Osvaldo Simeone

Contrastive Predictive Coding (CPC) is a representation learning method that maximizes the mutual information between intermediate latent representations and the output of a given model. It can be used to effectively initialize the encoder…

Computation and Language · Computer Science 2023-02-06 Aparna Khare , Minhua Wu , Saurabhchand Bhati , Jasha Droppo , Roland Maas

Machine-learning models are increasingly driving decisions in high-stakes settings, such as finance, law, and hiring, thus, highlighting the need for transparency. However, the key challenge is to balance transparency -- clarifying `why' a…

Artificial Intelligence · Computer Science 2025-08-29 Sopam Dasgupta , Sadaf MD Halim , Joaquín Arias , Elmer Salazar , Gopal Gupta

Counterfactual statements, which describe events that did not or cannot take place, are beneficial to numerous NLP applications. Hence, we consider the problem of counterfactual detection (CFD) and seek to enhance the CFD models. Previous…

Computation and Language · Computer Science 2024-10-01 Thong Nguyen , Truc-My Nguyen

Prompt Tuning has emerged as a prominent research paradigm for adapting vision-language models to various downstream tasks. However, recent research indicates that prompt tuning methods often lead to overfitting due to limited training…

Computer Vision and Pattern Recognition · Computer Science 2024-12-23 Jingchen Sun , Rohan Sharma , Vishnu Suresh Lokhande , Changyou Chen

Recent contrastive learning methods achieved state-of-the-art in low label regimes. However, the training requires large batch sizes and heavy augmentations to create multiple views of an image. With non-contrastive methods, the negatives…

Computer Vision and Pattern Recognition · Computer Science 2022-09-27 Taha Emre , Arunava Chakravarty , Antoine Rivail , Sophie Riedl , Ursula Schmidt-Erfurth , Hrvoje Bogunović

The key to multi-label image classification (MLC) is to improve model performance by leveraging label correlations. Unfortunately, it has been shown that overemphasizing co-occurrence relationships can cause the overfitting issue of the…

Computer Vision and Pattern Recognition · Computer Science 2024-06-14 Ming-Kun Xie , Jia-Hao Xiao , Pei Peng , Gang Niu , Masashi Sugiyama , Sheng-Jun Huang

A unified representation space in multi-modal learning is essential for effectively integrating diverse data sources, such as text, images, and audio, to enhance efficiency and performance across various downstream tasks. Recent binding…

Machine Learning · Computer Science 2025-10-08 Minoh Jeong , Zae Myung Kim , Min Namgung , Dongyeop Kang , Yao-Yi Chiang , Alfred Hero

It has been verified that only a small fraction of the neoantigens presented by MHC class I molecules on the cell surface can elicit T cells. The limitation can be attributed to the binding specificity of T cell receptor (TCR) to…

Quantitative Methods · Quantitative Biology 2022-06-24 Yiming Fang , Xuejun Liu , Hui Liu

Conformal Prediction (CP) has recently received a tremendous amount of interest, leading to a wide range of new theoretical and methodological results for predictive inference with formal theoretical guarantees. However, the vast majority…

Statistics Theory · Mathematics 2025-08-22 Manit Paul , Arun Kumar Kuchibhotla , Eric J. Tchetgen Tchetgen

Inductive Conformal Prediction (ICP) is a set of distribution-free and model agnostic algorithms devised to predict with a user-defined confidence with coverage guarantee. Instead of having point predictions, i.e., a real number in the case…

Machine Learning · Statistics 2022-07-05 Martim Sousa

Deep image prior (DIP) was recently introduced as an effective unsupervised approach for image restoration tasks. DIP represents the image to be recovered as the output of a deep convolutional neural network, and learns the network's…

Image and Video Processing · Electrical Eng. & Systems 2023-02-10 Riccardo Barbano , Johannes Leuschner , Maximilian Schmidt , Alexander Denker , Andreas Hauptmann , Peter Maaß , Bangti Jin

Feature extraction is crucial for human activity recognition (HAR) using body-worn movement sensors. Recently, learned representations have been used successfully, offering promising alternatives to manually engineered features. Our work…

Machine Learning · Computer Science 2020-12-11 Harish Haresamudram , Irfan Essa , Thomas Ploetz

Content-Based Image Retrieval (CIR) aims to search for a target image by concurrently comprehending the composition of an example image and a complementary text, which potentially impacts a wide variety of real-world applications, such as…

Artificial Intelligence · Computer Science 2022-07-12 Wenqiao Zhang , Jiannan Guo , Mengze Li , Haochen Shi , Shengyu Zhang , Juncheng Li , Siliang Tang , Yueting Zhuang

Counterfactual reasoning -- the practice of asking ``what if'' by varying inputs and observing changes in model behavior -- has become central to interpretable and fair AI. This thesis develops frameworks that use counterfactuals to…

Computer Vision and Pattern Recognition · Computer Science 2025-08-29 Pushkar Shukla

Counterfactual estimation over time is important in various applications, such as personalized medicine. However, time-dependent confounding bias in observational data still poses a significant challenge in achieving accurate and efficient…

Machine Learning · Computer Science 2026-03-13 Nghia D. Nguyen , Pablo Robles-Granda , Lav R. Varshney

Conditional generation models for longitudinal sequences can produce new or modified trajectories given a conditioning input. However, they often lack control over when the condition should take effect (timing) and which variables it should…

Machine Learning · Computer Science 2026-03-10 Michelle M. Li , Kevin Li , Yasha Ektefaie , Ying Jin , Yepeng Huang , Shvat Messica , Tianxi Cai , Marinka Zitnik

Predictive coding networks are neuroscience-inspired models with roots in both Bayesian statistics and neuroscience. Training such models, however, is quite inefficient and unstable. In this work, we show how by simply changing the temporal…

Neural and Evolutionary Computing · Computer Science 2024-02-08 Tommaso Salvatori , Yuhang Song , Yordan Yordanov , Beren Millidge , Zhenghua Xu , Lei Sha , Cornelius Emde , Rafal Bogacz , Thomas Lukasiewicz

Contrastive Language-Image Pretraining (CLIP) stands out as a prominent method for image representation learning. Various neural architectures, spanning Transformer-based models like Vision Transformers (ViTs) to Convolutional Networks…

Computer Vision and Pattern Recognition · Computer Science 2023-12-25 Cristian Rodriguez-Opazo , Edison Marrese-Taylor , Ehsan Abbasnejad , Hamed Damirchi , Ignacio M. Jara , Felipe Bravo-Marquez , Anton van den Hengel

Conformal Prediction (CP) is a distribution-free method for constructing prediction sets with marginal finite-sample coverage guarantees, making it a suitable framework for reliable uncertainty quantification in safety-critical object…

Computer Vision and Pattern Recognition · Computer Science 2026-05-11 Christopher Ries , Moussa Kassem Sbeyti , Nicolas Bianco , Nadja Klein