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In this work, we present a mathematical and computational framework to model the dynamics of open lipid bilayer membranes interacting with ambient Stokes flow. The model explicitly couples the three-dimensional viscous fluid, the…

Numerical Analysis · Mathematics 2026-01-21 Han Zhou , Yuan-Nan Young , Yoichiro Mori

The Edge-Based Interface Tracking (EBIT) method is a novel Front-Tracking method where the markers are located on grid edges, and their connectivity is implicitly represented by a color vertex field. This localized representation simplifies…

Fluid Dynamics · Physics 2025-10-01 Jieyun Pan , Tian Long , Ruben Scardovelli , Stéphane Popinet , Stéphane Zaleski

Modeling the effect of complex terrain on high Reynolds number flows is important to improve our understanding of flow dynamics in wind farms and the dispersion of pollen and pollutants in hilly or mountainous terrain as well as the flow in…

Computational Physics · Physics 2021-03-11 Luoqin Liu , Richard J. A. M. Stevens

In this paper we develop a new technique, called \textit{state redistribution}, that allows the use of explicit time stepping when approximating solutions to hyperbolic conservation laws on embedded boundary grids. State redistribution is a…

Numerical Analysis · Mathematics 2021-02-03 Marsha Berger , Andrew Giuliani

A boundary thickening-based direct forcing (BTDF) immersed boundary (IB) method is proposed for fully resolved simulation of incompressible viscous flows laden with finite size particles. By slightly thickening the boundary thickness, the…

Computational Physics · Physics 2020-06-26 Maoqiang Jiang , Zhaohui Liu

A new formulation of the immersed boundary method, which facilitates accurate simulation of incompressible isothermal and natural convection flows around immersed bodies and which may be applied for accurate linear stability analysis of the…

Fluid Dynamics · Physics 2015-12-17 Yuri Feldman , Yosef Gulberg

Fluid flows containing dilute or dense suspensions of thin fibers are widespread in biological and industrial processes. To describe the motion of a thin immersed fiber, or to describe the forces acting on it, it is convenient to work with…

Numerical Analysis · Mathematics 2021-12-03 William H. Mitchell , Henry G. Bell , Yoichiro Mori , Laurel Ohm , Daniel Spirn

We present a new method for modeling tissue perfusion on the capillary scale. The microvasculature is represented by a network of one-dimensional vessel segments embedded in the extra-vascular space. Vascular and extra-vascular space…

Computational Physics · Physics 2020-03-23 Timo Koch , Martin Schneider , Rainer Helmig , Patrick Jenny

In this work we consider how surface-adherent bacterial biofilm communities respond in flowing systems. We simulate the fluid-structure interaction and separation process using the immersed boundary method. In these simulations we model and…

Numerical Analysis · Mathematics 2013-02-18 Jason F. Hammond , Elizabeth J. Stewart , John G. Younger , Michael J. Solomon , David M. Bortz

We present an immersed boundary method to simulate the creeping motion of a rigid particle in a fluid described by the Stokes equations discretized thanks to a finite element strategy on unfitted meshes, called Phi-FEM, that uses the…

Numerical Analysis · Mathematics 2023-01-30 Michel Duprez , Vanessa Lleras , Alexei Lozinski

The immersed boundary (IB) method is a mathematical and numerical framework for problems of fluid-structure interaction, treating the particular case in which an elastic structure is immersed in a viscous incompressible fluid. The IB…

Computational Engineering, Finance, and Science · Computer Science 2017-03-29 Boyce E. Griffith

The development of a wall model using machine learning methods for the large-eddy simulation (LES) of separated flows is still an unsolved problem. Our approach is to leverage the significance of separated flow data, for which existing…

Fluid Dynamics · Physics 2024-12-25 Zhideng Zhou , Xin-lei Zhang , Guo-wei He , Xiaolei Yang

Accurate simulation of fluid flow and transport in fractured porous media is a key challenge in subsurface reservoir engineering. Due to the high ratio between its length and width, fractures can be modeled as lower dimensional interfaces…

Numerical Analysis · Mathematics 2018-03-12 Lars H. Odsæter , Trond Kvamsdal , Mats G. Larson

This paper deals with a new solid-fluid coupling algorithm between a rigid body and an unsteady compressible fluid flow, using an Embedded Boundary method. The coupling with a rigid body is a first step towards the coupling with a Discrete…

Numerical Analysis · Mathematics 2016-12-01 Laurent Monasse , Virginie Daru , Christian Mariotti , Serge Piperno , Christian Tenaud

We present a novel framework to deal with static and moving immersed boundaries (IB). In this strategy, called Volume-Filtering Immersed Boundary (VFIB) method, transport equations are derived by filtering the Navier-Stokes equations and…

Fluid Dynamics · Physics 2023-05-24 Himanshu Dave , Marcus Herrmann , M. Houssem Kasbaoui

We present a collocated-grid framework for Direct Numerical Simulations of polydisperse particles submerged in a viscous fluid. The fluid-particle forces are coupled with the Immersed Boundary Method (IBM) while the particle-particle forces…

We present and analyze a series of benchmark tests regarding the application of the immersed boundary (IB) method to viscoelastic flows through and around non-trivial, stationary geometries. The IB method is widely used for the simulation…

Fluid Dynamics · Physics 2024-01-17 Cole Gruninger , Aaron Barrett , Fuhui Fang , M. Gregory Forest , Boyce E. Griffith

We extend the shifted boundary method (SBM) to the simulation of incompressible fluid flow using immersed octree meshes. Previous work on SBM for fluid flow primarily utilized two- or three-dimensional unstructured tetrahedral grids.…

This paper presents a general and robust method for the fluid-structure interaction of membranes and shells undergoing large displacement and large added-mass effects by coupling an immersed-boundary method with a shell finite-element…

Fluid Dynamics · Physics 2023-08-15 Marin Lauber , Gabriel D. Weymouth , Georges Limbert

In this paper, a three-dimensional numerical solver is developed for suspensions of rigid and soft particles and droplets in viscoelastic and elastoviscoplastic (EVP) fluids. The presented algorithm is designed to allow for the first time…