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Photoacoustic imaging (PAI) is a promising emerging imaging modality that enables spatially resolved imaging of optical tissue properties up to several centimeters deep in tissue, creating the potential for numerous exciting clinical…

Medical Physics · Physics 2021-04-15 Janek Gröhl , Melanie Schellenberg , Kris Dreher , Lena Maier-Hein

As an indispensable part of modern human-computer interaction system, speech synthesis technology helps users get the output of intelligent machine more easily and intuitively, thus has attracted more and more attention. Due to the…

Sound · Computer Science 2021-04-21 Zhaoxi Mu , Xinyu Yang , Yizhuo Dong

We propose an automatic data processing pipeline to extract vocal productions from large-scale natural audio recordings and classify these vocal productions. The pipeline is based on a deep neural network and adresses both issues…

Many ecosystems can undergo important qualitative changes, including sudden transitions to alternative stable states, in response to perturbations or increments in conditions. Such 'tipping points' are often preceded by declines in aspects…

Populations and Evolution · Quantitative Biology 2025-09-04 Neel P. Le Penru , Thomas M. Bury , Sarab S. Sethi , Robert M. Ewers , Lorenzo Picinali

The analysis of experimental results with Python often requires writing many code scripts which all need access to the same set of functions. In a common field of research, this set will be nearly the same for many users. The qspec Python…

Computational Physics · Physics 2025-03-18 Patrick Müller , Wilfried Nörtershäuser

When modeling complex, hierarchical, and time-dynamic systems, such as biological systems, good computational tools are essential. Current tools, while powerful, often lack comprehensive frameworks for modular model composition,…

Quantitative Methods · Quantitative Biology 2025-10-17 Henrik Podéus , Gustav Magnusson , Sasan Keshmiri , Kajsa Tunedal , Nicolas Sundqvist , William Lövfors , Gunnar Cedersund

This work focuses on reliable detection of bird sound emissions as recorded in the open field. Acoustic detection of avian sounds can be used for the automatized monitoring of multiple bird taxa and querying in long-term recordings for…

Sound · Computer Science 2016-09-28 Ilyas Potamitis

Acoustic Holography is an emerging field where mid-air ultrasound is controlled and manipulated for novel and exciting applications. These range from mid-air haptics, volumetric displays, contactless fabrication, and even chemical and…

Automated data-driven modeling, the process of directly discovering the governing equations of a system from data, is increasingly being used across the scientific community. PySINDy is a Python package that provides tools for applying the…

Summary: Data management in clinical metabolomics studies is often inadequate. To improve this situation we created LabPipe to provide a guided, customisable approach to study-specific sample collection. It is driven through a local client…

Humans can robustly recognize and localize objects by integrating visual and auditory cues. While machines are able to do the same now with images, less work has been done with sounds. This work develops an approach for dense semantic…

Computer Vision and Pattern Recognition · Computer Science 2020-03-10 Arun Balajee Vasudevan , Dengxin Dai , Luc Van Gool

In recent years, data-driven models have enabled significant advances in medicine. Simultaneously, voice has shown potential for analysis in precision medicine as a biomarker for screening illnesses. There has been a growing trend to pursue…

Audio and Speech Processing · Electrical Eng. & Systems 2019-06-20 Larry Zhang , Xiaotong Chen , Abbad Vakil , Ali Byott , Reza Hosseini Ghomi

Sound modelling is the process of developing algorithms that generate sound under parametric control. There are a few distinct approaches that have been developed historically including modelling the physics of sound production and…

Audio and Speech Processing · Electrical Eng. & Systems 2020-11-26 M. Huzaifah , L. Wyse

Python has emerged as one of the most popular programming languages, extensively utilized in domains such as machine learning, data analysis, and web applications. Python's dynamic nature and extensive usage make it an attractive candidate…

Software Engineering · Computer Science 2024-03-04 Islem Bouzenia , Bajaj Piyush Krishan , Michael Pradel

The deep learning revolution is touching all scientific disciplines and corners of our lives as a means of harnessing the power of big data. Marine ecology is no exception. These new methods provide analysis of data from sensors, cameras,…

This paper presents Zwitscherkasten, a DiY, multimodal system for bird species monitoring using audio and visual data on edge devices. Deep learning models for bioacoustic and image-based classification are deployed on resource-constrained…

Computer Vision and Pattern Recognition · Computer Science 2026-02-17 Dominik Blum , Elias Häring , Fabian Jirges , Martin Schäffer , David Schick , Florian Schulenberg , Torsten Schön

Background and Objective: Deep learning enables tremendous progress in medical image analysis. One driving force of this progress are open-source frameworks like TensorFlow and PyTorch. However, these frameworks rarely address issues…

Image and Video Processing · Electrical Eng. & Systems 2021-04-29 Alain Jungo , Olivier Scheidegger , Mauricio Reyes , Fabian Balsiger

Humans can robustly recognize and localize objects by using visual and/or auditory cues. While machines are able to do the same with visual data already, less work has been done with sounds. This work develops an approach for scene…

Sound · Computer Science 2022-03-01 Dengxin Dai , Arun Balajee Vasudevan , Jiri Matas , Luc Van Gool

Deploying deep learning models on embedded devices is an arduous task: oftentimes, there exist no platform-specific instructions, and compilation times can be considerably large due to the limited computational resources available…

Sound · Computer Science 2023-06-21 Teresa Pelinski , Rodrigo Diaz , Adán L. Benito Temprano , Andrew McPherson

Studying facial expressions is a notoriously difficult endeavor. Recent advances in the field of affective computing have yielded impressive progress in automatically detecting facial expressions from pictures and videos. However, much of…

Computer Vision and Pattern Recognition · Computer Science 2023-03-09 Jin Hyun Cheong , Eshin Jolly , Tiankang Xie , Sophie Byrne , Matthew Kenney , Luke J. Chang