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The classical persistence algorithm computes the unique decomposition of a persistence module implicitly given by an input simplicial filtration. Based on matrix reduction, this algorithm is a cornerstone of the emergent area of topological…

Algebraic Topology · Mathematics 2021-12-07 Tamal K. Dey , Cheng Xin

Given topological spaces X and Y, a fundamental problem of algebraic topology is understanding the structure of all continuous maps X -> Y . We consider a computational version, where X, Y are given as finite simplicial complexes, and the…

Computational Geometry · Computer Science 2014-01-31 Martin Čadek , Marek Krčál , Jiří Matoušek , Francis Sergeraert , Lukáš Vokřínek , Uli Wagner

Most algorithms for computing persistent homology do so by tracking cycles that represent homology classes. There are many choices of such cycles, and specific choices have found different uses in applications. Although it is known that…

Algebraic Topology · Mathematics 2025-04-01 Dmitriy Morozov , Primoz Skraba

We extend the persistence algorithm, viewed as an algorithm computing the homology of a complex of free persistence or graded modules, to complexes of modules that are not free. We replace persistence modules by their presentations and…

Algebraic Topology · Mathematics 2024-03-19 Tamal K. Dey , Florian Russold , Shreyas N. Samaga

The task of computing homomorphisms between two finite relational structures $\mathcal{A}$ and $\mathcal{B}$ is a well-studied question with numerous applications. Since the set $\operatorname{Hom}(\mathcal{A},\mathcal{B})$ of all…

Data Structures and Algorithms · Computer Science 2023-05-29 Christoph Berkholz , Harry Vinall-Smeeth

Let $X$ and $Y$ be finite simplicial sets (e.g. finite simplicial complexes), both equipped with a free simplicial action of a finite group $G$. Assuming that $Y$ is $d$-connected and $\dim X\le 2d$, for some $d\geq 1$, we provide an…

Algebraic Topology · Mathematics 2016-10-10 Martin Čadek , Marek Krčál , Lukáš Vokřínek

Homology features of spaces which appear in applications, for instance 3D meshes, are among the most important topological properties of these objects. Given a non-trivial cycle in a homology class, we consider the problem of computing a…

Computational Geometry · Computer Science 2022-03-18 Erin Wolf Chambers , Salman Parsa , Hannah Schreiber

The main result of this paper is an application of the topology of the space $Q(X)$ to obtain results for the cohomology of the symmetric group on $d$ letters, $\Sigma_d$, with `twisted' coefficients in various choices of Young modules and…

Representation Theory · Mathematics 2009-12-29 Frederick R. Cohen , David J. Hemmer , Daniel K. Nakano

Dey and Xin (J.Appl.Comput.Top., 2022, arXiv:1904.03766) describe an algorithm to decompose finitely presented multiparameter persistence modules using a matrix reduction algorithm. Their algorithm only works for modules whose generators…

Representation Theory · Mathematics 2025-11-25 Tamal K. Dey , Jan Jendrysiak , Michael Kerber

We introduce a new algorithm to parallelise the computation of persistent homology of 2D alpha complexes. Our algorithm distributes the input point cloud among the cores which then compute a cover based on a rectilinear grid. We show how to…

Algebraic Topology · Mathematics 2024-03-04 Freya Jensen , Álvaro Torras-Casas

We present an algorithm that, given finite simplicial sets $X$, $A$, $Y$ with an action of a finite group $G$, computes the set $[X,Y]^A_G$ of homotopy classes of equivariant maps $\ell \colon X \to Y$ extending a given equivariant map $f…

Algebraic Topology · Mathematics 2022-11-28 Marek Filakovský , Lukáš Vokřínek

Persistent homology is a fundamental tool in Topological Data Analysis. The associated algebraic structure is the persistence module, a sequence of vector spaces connected by linear maps. Persistence modules admit a complete and…

Algebraic Topology · Mathematics 2026-02-13 R. Gonzalez-Diaz , M. Soriano-Trigueros , A. Torras-Casas

The study of persistent homology has contributed new insights and perspectives into a variety of interesting problems in science and engineering. Work in this domain relies on the result that any finitely-indexed persistence module of…

Algebraic Topology · Mathematics 2025-10-07 Jiajie Luo , Gregory Henselman-Petrusek

In the field of topological data analysis, persistence modules are used to express geometrical features of data sets. The matching distance $d_\mathcal{M}$ measures the difference between $2$-parameter persistence modules by taking the…

Algebraic Topology · Mathematics 2023-12-08 Håvard Bakke Bjerkevik , Michael Kerber

Many datasets can be viewed as a noisy sampling of an underlying space, and tools from topological data analysis can characterize this structure for the purpose of knowledge discovery. One such tool is persistent homology, which provides a…

It is well-known that the cohomology ring has a richer structure than homology groups. However, until recently, the use of cohomology in persistence setting has been limited to speeding up of barcode computations. Some of the recently…

Computational Geometry · Computer Science 2024-03-19 Tamal K. Dey , Abhishek Rathod

The theory of multidimensional persistent homology was initially developed in the discrete setting, and involved the study of simplicial complexes filtered through an ordering of the simplices. Later, stability properties of…

Computational Geometry · Computer Science 2013-03-28 Niccolò Cavazza , Marc Ethier , Patrizio Frosini , Tomasz Kaczynski , Claudia Landi

Let K be a subfield of the complex numbers, and let D be the Weyl algebra of K-linear differential operators on K[x_1,...,x_n]. If M and N are holonomic left D-modules we present an algorithm that computes explicit generators for the finite…

Rings and Algebras · Mathematics 2007-05-23 Harrison Tsai , Uli Walther

Persistent homology is a topological feature used in a variety of applications such as generating features for data analysis and penalizing optimization problems. We develop an approach to accelerate persistent homology computations…

Algebraic Topology · Mathematics 2023-01-19 Yuan Luo , Bradley J. Nelson

Biological and physical systems often exhibit distinct structures at different spatial/temporal scales. Persistent homology is an algebraic tool that provides a mathematical framework for analyzing the multi-scale structures frequently…

Algebraic Topology · Mathematics 2016-02-01 Jonathan Jaquette , Miroslav Kramár
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