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Single-cell RNA sequencing (scRNA-seq) data exhibit strong and reproducible statistical structure. This has motivated the development of large-scale foundation models, such as TranscriptFormer, that use transformer-based architectures to…

Genomics · Quantitative Biology 2026-02-19 Huan Souza , Pankaj Mehta

By adequate employing of complex event processing (CEP), valuable information can be extracted from the underlying complex system and used in controlling and decision situations. An example application area is management of IT systems for…

Software Engineering · Computer Science 2012-08-02 Istvan David

We introduce FLEX (FLow EXpert), a backbone architecture for generative modeling of spatio-temporal physical systems using diffusion models. FLEX operates in the residual space rather than on raw data, a modeling choice that we motivate…

Machine Learning · Computer Science 2025-05-26 N. Benjamin Erichson , Vinicius Mikuni , Dongwei Lyu , Yang Gao , Omri Azencot , Soon Hoe Lim , Michael W. Mahoney

Detecting payment fraud in real-world banking streams requires models that can exploit both the order of events and the irregular time gaps between them. We introduce FraudTransformer, a sequence model that augments a vanilla GPT-style…

Reaction-diffusion processes are the foundational model for a diverse range of complex systems, ranging from biochemical reactions to social agent-based phenomena. The underlying dynamics of these systems occur at the individual…

Statistical Mechanics · Physics 2025-10-15 Mauricio J. del Razo , Margarita Kostré

In recent years, the research of multi-agent systems has taken a direction to explore larger and more complex models to fulfill sophisticated tasks. We point out two possible pitfalls that might be caused by increasing complexity;…

Multiagent Systems · Computer Science 2025-11-07 Umut Çalıkyılmaz , Nitin Nayak , Jinghua Groppe , Sven Groppe

In branching simulation, a novel approach to simulation presented in this paper, a multiplicity of plausible scenarios are concurrently developed and implemented. In conventional simulations of complex systems, there arise from time to time…

Computational Engineering, Finance, and Science · Computer Science 2007-05-23 Mark Burgin , Walter Karplus , Damon Liu

Over the past decade, machine learning has revolutionized computers' ability to analyze text through flexible computational models. Due to their structural similarity to written language, transformer-based architectures have also shown…

With the increase of the search for computational models where the expression of parallelism occurs naturally, some paradigms arise as options for the next generation of computers. In this context, dynamic Dataflow and Gamma - General…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-11-05 Rui R. Mello Junior , Leandro S. Araujo , Tiago A. O. Alves , Leandro A. J. Marzulo , Gabriel A. L. Paillard , Felipe M. G. França

Data imputation and data generation have important applications for many domains, like healthcare and finance, where incomplete or missing data can hinder accurate analysis and decision-making. Diffusion models have emerged as powerful…

Machine Learning · Computer Science 2025-06-10 Mario Villaizán-Vallelado , Matteo Salvatori , Carlos Segura , Ioannis Arapakis

The ubiquity of payment networks generates vast transactional data encoding rich consumer and merchant behavioral patterns. Recent foundation models for transaction analysis process tabular data sequentially but rely on index-based…

Computation and Language · Computer Science 2026-01-12 Xiran Fan , Zhimeng Jiang , Chin-Chia Michael Yeh , Yuzhong Chen , Yingtong Dou , Menghai Pan , Yan Zheng

Foundation models have recently attracted significant attention for their impressive generalizability across diverse downstream tasks. However, these models are demonstrated to exhibit great limitations in representing high-frequency…

Image and Video Processing · Electrical Eng. & Systems 2025-04-18 Yuetan Chu , Yilan Zhang , Zhongyi Han , Changchun Yang , Longxi Zhou , Gongning Luo , Chao Huang , Xin Gao

Data scaling has revolutionized research fields like natural language processing, computer vision, and robotics control, providing foundation models with remarkable multi-task and generalization capabilities. In this paper, we investigate…

Systems and Control · Electrical Eng. & Systems 2025-03-27 Shaohuai Liu , Lin Dong , Chao Tian , Le Xie

In recent years, event cameras have gained significant attention due to their bio-inspired properties, such as high temporal resolution and high dynamic range. However, obtaining large-scale labeled ground-truth data for event-based vision…

Computer Vision and Pattern Recognition · Computer Science 2025-12-01 Yixuan Hu , Yuxuan Xue , Simon Klenk , Daniel Cremers , Gerard Pons-Moll

Wind power ramp events are difficult to forecast due to strong variability, multi-scale dynamics, and site-specific meteorological effects. This paper proposes an event-first, frequency-aware forecasting paradigm that directly predicts ramp…

Machine Learning · Computer Science 2026-02-09 Purbak Sengupta , Sambeet Mishra , Sonal Shreya

Conventional diffusion models typically relies on a fixed forward process, which implicitly defines complex marginal distributions over latent variables. This can often complicate the reverse process' task in learning generative…

Machine Learning · Statistics 2025-06-10 Grigory Bartosh , Dmitry Vetrov , Christian A. Naesseth

Scaling laws have transformed our understanding of large language models by linking upstream metrics like cross-entropy loss to design factors such as model size, training data, and compute. However, these conventional laws fail to capture…

Computation and Language · Computer Science 2025-10-17 Kyle Montgomery , David Park , Jianhong Tu , Michael Bendersky , Beliz Gunel , Dawn Song , Chenguang Wang

In the past few years, time series foundation models have achieved superior predicting accuracy. However, real-world time series often exhibit significant diversity in their temporal patterns across different time spans and domains, making…

Machine Learning · Computer Science 2026-03-19 Aobo Liang , Yan Sun , Xiaohou Shi , Ke Li

Complex heterogeneous dynamic networks like knowledge graphs are powerful constructs that can be used in modeling data provenance from computer systems. From a security perspective, these attributed graphs enable causality analysis and…

Cryptography and Security · Computer Science 2022-03-08 Maya Kapoor , Joshua Melton , Michael Ridenhour , Mahalavanya Sriram , Thomas Moyer , Siddharth Krishnan

Large language models have shown astonishing performance on a wide range of reasoning tasks. In this paper, we investigate whether they could reason about real-world events and help improve the prediction performance of event sequence…

Computation and Language · Computer Science 2023-10-10 Xiaoming Shi , Siqiao Xue , Kangrui Wang , Fan Zhou , James Y. Zhang , Jun Zhou , Chenhao Tan , Hongyuan Mei
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