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Automating molecular design using deep reinforcement learning (RL) holds the promise of accelerating the discovery of new chemical compounds. Existing approaches work with molecular graphs and thus ignore the location of atoms in space,…

Machine Learning · Statistics 2021-03-02 Gregor N. C. Simm , Robert Pinsler , José Miguel Hernández-Lobato

Large language model (LLM) agents typically rely on reactive decision-making paradigms such as ReAct, selecting actions conditioned on growing execution histories. While effective for short tasks, these approaches often lead to redundant…

Artificial Intelligence · Computer Science 2026-03-02 Yihan , Wen , Xin Chen

We present a framework, which we call Molecule Deep $Q$-Networks (MolDQN), for molecule optimization by combining domain knowledge of chemistry and state-of-the-art reinforcement learning techniques (double $Q$-learning and randomized value…

Machine Learning · Computer Science 2020-06-22 Zhenpeng Zhou , Steven Kearnes , Li Li , Richard N. Zare , Patrick Riley

Molecular optimization in drug discovery aims to discover molecules with improved target properties, but practical lead optimization often requires more than high predicted scores. A useful candidate should also be actionable: it should be…

Machine Learning · Computer Science 2026-05-12 Yang Qiao , Bo Pan , Hao-Wei Pang , Peter Zhiping Zhang , Liying Zhang , Liang Zhao

Large Language Models (LLMs) have shown remarkable reasoning capabilities in mathematical and scientific tasks. To enhance complex reasoning, multi-agent systems have been proposed to harness the collective intelligence of LLM agents.…

Artificial Intelligence · Computer Science 2025-10-22 Zhenyu Bi , Meng Lu , Yang Li , Swastik Roy , Weijie Guan , Morteza Ziyadi , Xuan Wang

The ReAct (Reasoning + Action) capability in large language models (LLMs) has become the foundation of modern agentic systems. Recent LLMs, such as DeepSeek-R1 and OpenAI o1/o3, exemplify this by emphasizing reasoning through the generation…

Artificial Intelligence · Computer Science 2025-05-20 Mrinal Rawat , Ambuje Gupta , Rushil Goomer , Alessandro Di Bari , Neha Gupta , Roberto Pieraccini

Reinforcement Learning (RL) agents often struggle in sparse-reward environments where traditional exploration strategies fail to discover effective action sequences. Large Language Models (LLMs) possess procedural knowledge and reasoning…

Machine Learning · Computer Science 2025-10-13 Vaibhav Jain , Gerrit Grossmann

While Large Language Models (LLMs) excel at algorithmic code generation, they struggle with front-end development, where correctness is judged on rendered pixels and interaction. We present ReLook, an agentic, vision-grounded reinforcement…

Machine Learning · Computer Science 2025-10-14 Yuhang Li , Chenchen Zhang , Ruilin Lv , Ao Liu , Ken Deng , Yuanxing Zhang , Jiaheng Liu , Wiggin Zhou , Bo Zhou

Ensembling large language models (LLMs) can effectively combine diverse strengths of different models, offering a promising approach to enhance performance across various tasks. However, existing methods typically rely on fixed weighting…

Machine Learning · Computer Science 2025-06-03 Yuqian Fu , Yuanheng Zhu , Jiajun Chai , Guojun Yin , Wei Lin , Qichao Zhang , Dongbin Zhao

Intelligent agent systems based on Large Language Models (LLMs) have shown great potential in real-world applications. However, existing agent frameworks still face critical limitations in task planning and execution, restricting their…

Information Retrieval · Computer Science 2025-04-30 Junjie Chen , Haitao Li , Jingli Yang , Yiqun Liu , Qingyao Ai

Large Language Models (LLMs) have achieved remarkable advancements in natural language processing tasks, yet they encounter challenges in complex decision-making scenarios that require long-term reasoning and alignment with high-level…

Computation and Language · Computer Science 2025-06-10 Heng Dong , Kefei Duan , Chongjie Zhang

Deep Reinforcement Learning (RL) is remarkably effective in addressing sequential resource allocation problems in domains such as healthcare, public policy, and resource management. However, deep RL policies often lack transparency and…

Machine Learning · Computer Science 2025-02-18 Mauricio Tec , Guojun Xiong , Haichuan Wang , Francesca Dominici , Milind Tambe

Multi-agent reinforcement learning (MARL) holds substantial promise for intelligent decision-making in complex environments. However, it suffers from a coordination and scalability bottleneck as the number of agents increases. To address…

Multiagent Systems · Computer Science 2025-09-19 Tianyang Duan , Zongyuan Zhang , Songxiao Guo , Dong Huang , Yuanye Zhao , Zheng Lin , Zihan Fang , Dianxin Luan , Heming Cui , Yong Cui

Large language models (LLMs) augmented with external tools are increasingly deployed as deep research agents that gather, reason over, and synthesize web information to answer complex queries. Although recent open-source systems achieve…

Artificial Intelligence · Computer Science 2026-02-24 Yi Wan , Jiuqi Wang , Liam Li , Jinsong Liu , Ruihao Zhu , Zheqing Zhu

Reinforcement Learning is a powerful framework for training agents to navigate different situations, but it is susceptible to changes in environmental dynamics. However, solving Markov Decision Processes that are robust to changes is…

Machine Learning · Computer Science 2024-06-21 Etash Kumar Guha

Large language models (LLMs) integrated with autonomous agents hold significant potential for advancing scientific discovery through automated reasoning and task execution. However, applying LLM agents to drug discovery is still constrained…

Artificial Intelligence · Computer Science 2025-07-29 Kun Li , Zhennan Wu , Shoupeng Wang , Jia Wu , Shirui Pan , Wenbin Hu

Chemical Language Models (CLMs) leveraging reinforcement learning (RL) have shown promise in de novo molecular design, yet often suffer from mode collapse, limiting their exploration capabilities. Inspired by Test-Time Training (TTT) in…

Machine Learning · Computer Science 2025-12-04 Morgan Thomas , Albert Bou , Gianni De Fabritiis

Answering complex natural language questions often necessitates multi-step reasoning and integrating external information. Several systems have combined knowledge retrieval with a large language model (LLM) to answer such questions. These…

Lead optimization is a pivotal task in the drug design phase within the drug discovery lifecycle. The primary objective is to refine the lead compound to meet specific molecular properties for progression to the subsequent phase of…

Biomolecules · Quantitative Biology 2024-07-22 Siddartha Reddy N , Sai Prakash MV , Varun V , Vishal Vaddina , Saisubramaniam Gopalakrishnan

Recent advances have shown that optimizing prompts for Large Language Models (LLMs) can significantly improve task performance, yet many optimization techniques rely on heuristics or manual exploration. We present LatentPrompt, a…

Computation and Language · Computer Science 2025-08-05 Mateusz Bystroński , Grzegorz Piotrowski , Nitesh V. Chawla , Tomasz Kajdanowicz