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The integrative analysis of histopathological images and genomic data has received increasing attention for survival prediction of human cancers. However, the existing studies always hold the assumption that full modalities are available.…

Computer Vision and Pattern Recognition · Computer Science 2025-03-19 Junjie Zhou , Jiao Tang , Yingli Zuo , Peng Wan , Daoqiang Zhang , Wei Shao

As an important problem in causal inference, we discuss the identification and estimation of treatment effects (TEs) under limited overlap; that is, when subjects with certain features belong to a single treatment group. We use a latent…

Machine Learning · Statistics 2022-04-22 Pengzhou Wu , Kenji Fukumizu

We present a simple neural rendering architecture that helps variational autoencoders (VAEs) learn disentangled representations. Instead of the deconvolutional network typically used in the decoder of VAEs, we tile (broadcast) the latent…

Machine Learning · Computer Science 2019-08-15 Nicholas Watters , Loic Matthey , Christopher P. Burgess , Alexander Lerchner

Deep generative models are increasingly becoming integral parts of the in silico molecule design pipeline and have dual goals of learning the chemical and structural features that render candidate molecules viable while also being flexible…

Biomolecules · Quantitative Biology 2021-06-08 Yair Schiff , Vijil Chenthamarakshan , Karthikeyan Natesan Ramamurthy , Payel Das

Variational Autoencoders (VAEs) are powerful generative models that have been widely used in various fields, including image and text generation. However, one of the known challenges in using VAEs is the model's sensitivity to its…

Machine Learning · Computer Science 2024-12-31 Gabriela Sejnova , Michal Vavrecka , Karla Stepanova

This is a tutorial and survey paper on factor analysis, probabilistic Principal Component Analysis (PCA), variational inference, and Variational Autoencoder (VAE). These methods, which are tightly related, are dimensionality reduction and…

Machine Learning · Statistics 2022-05-25 Benyamin Ghojogh , Ali Ghodsi , Fakhri Karray , Mark Crowley

Identifying customer segments in retail banking portfolios with different risk profiles can improve the accuracy of credit scoring. The Variational Autoencoder (VAE) has shown promising results in different research domains, and it has been…

Computational Engineering, Finance, and Science · Computer Science 2018-06-08 Rogelio Andrade Mancisidor , Michael Kampffmeyer , Kjersti Aas , Robert Jenssen

The spatiotemporal dynamics of turbulent flows is chaotic and difficult to predict. This makes the design of accurate and stable reduced-order models challenging. The overarching objective of this paper is to propose a nonlinear…

Fluid Dynamics · Physics 2022-11-23 Alberto Racca , Nguyen Anh Khoa Doan , Luca Magri

Deep learning (DL) methods where interpretability is intrinsically considered as part of the model are required to better understand the relationship of clinical and imaging-based attributes with DL outcomes, thus facilitating their use in…

Image and Video Processing · Electrical Eng. & Systems 2022-12-13 Irem Cetin , Maialen Stephens , Oscar Camara , Miguel Angel Gonzalez Ballester

The variational auto-encoder (VAE) is a popular method for learning a generative model and embeddings of the data. Many real datasets are hierarchically structured. However, traditional VAEs map data in a Euclidean latent space which cannot…

Machine Learning · Statistics 2019-11-27 Emile Mathieu , Charline Le Lan , Chris J. Maddison , Ryota Tomioka , Yee Whye Teh

Generative models for multimodal data permit the identification of latent factors that may be associated with important determinants of observed data heterogeneity. Common or shared factors could be important for explaining variation across…

Machine Learning · Statistics 2024-03-12 Kaspar Märtens , Christopher Yau

Variational Autoencoders (VAEs) are powerful generative models capable of learning compact latent representations. However, conventional VAEs often generate relatively blurry images due to their assumption of an isotropic Gaussian latent…

Computer Vision and Pattern Recognition · Computer Science 2025-04-21 Andrew Kiruluta

We study the role of latent space dimensionality in Wasserstein auto-encoders (WAEs). Through experimentation on synthetic and real datasets, we argue that random encoders should be preferred over deterministic encoders. We highlight the…

Machine Learning · Statistics 2018-02-13 Paul K. Rubenstein , Bernhard Schoelkopf , Ilya Tolstikhin

Autoencoders have found widespread application in both their original deterministic form and in their variational formulation (VAEs). In scientific applications and in image processing it is often of interest to consider data that are…

Machine Learning · Statistics 2025-09-09 Justin Bunker , Mark Girolami , Hefin Lambley , Andrew M. Stuart , T. J. Sullivan

Variational Autoencoder (VAE) aims to compress pixel data into low-dimensional latent space, playing an important role in OpenAI's Sora and other latent video diffusion generation models. While most of existing video VAEs inflate a…

Computer Vision and Pattern Recognition · Computer Science 2024-11-12 Pingyu Wu , Kai Zhu , Yu Liu , Liming Zhao , Wei Zhai , Yang Cao , Zheng-Jun Zha

Variational AutoEncoders (VAEs) provide a means to generate representational latent embeddings. Previous research has highlighted the benefits of achieving representations that are disentangled, particularly for downstream tasks. However,…

Computer Vision and Pattern Recognition · Computer Science 2019-11-18 Matthew J. Vowels , Necati Cihan Camgoz , Richard Bowden

Current state-of-the-art generative approaches frequently rely on a two-stage training procedure, where an autoencoder (often a VAE) first performs dimensionality reduction, followed by training a generative model on the learned latent…

Machine Learning · Statistics 2025-07-15 Gianluigi Silvestri , Luca Ambrogioni

Variational Autoencoders (VAEs) often exhibit a polarised regime in which latent variables separate into active, passive, and mixed subsets. Existing criteria for identifying active dimensions depend on a Gaussian prior, limiting their…

Machine Learning · Computer Science 2026-05-18 Peter Clapham , Lisa Bonheme , Marek Grzes

Geostationary hyperspectral satellites generate terabytes of data daily, creating critical challenges for storage, transmission, and distribution to the scientific community. We present a variational autoencoder (VAE) approach that achieves…

Machine Learning · Computer Science 2025-11-25 Core Francisco Park , Manuel Perez-Carrasco , Caroline Nowlan , Cecilia Garraffo

Successfully training Variational Autoencoders (VAEs) with a hierarchy of discrete latent variables remains an area of active research. Vector-Quantised VAEs are a powerful approach to discrete VAEs, but naive hierarchical extensions can be…

Machine Learning · Statistics 2021-02-05 Matthew Willetts , Xenia Miscouridou , Stephen Roberts , Chris Holmes
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