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The inner representation of deep neural networks (DNNs) is indecipherable, which makes it difficult to tune DNN models, control their training process, and interpret their outputs. In this paper, we propose a novel approach to investigate…

Machine Learning · Computer Science 2021-06-08 Satoru Watanabe , Hayato Yamana

Recent years have witnessed a fast growth in mathematical artificial intelligence (AI). One of the most successful mathematical AI approaches is topological data analysis (TDA) via persistent homology (PH) that provides explainable AI (xAI)…

General Topology · Mathematics 2025-10-27 Yiming Ren , Guowei Wei

In this work we use the persistent homology method, a technique in topological data analysis (TDA), to extract essential topological features from the data space and combine them with deep learning features for classification tasks. In TDA,…

Computer Vision and Pattern Recognition · Computer Science 2023-11-14 Mariana Dória Prata Lima , Gilson Antonio Giraldi , Gastão Florêncio Miranda Junior

Two-dimensional (2D) particle systems, such as magnetic skyrmions, exhibit topological phase transitions between unique 2D phases. However, a simple and computationally efficient methodology to capture lattice configurational properties and…

Persistent homology (PH) is a popular tool for topological data analysis that has found applications across diverse areas of research. It provides a rigorous method to compute robust topological features in discrete experimental…

Machine Learning · Computer Science 2023-07-19 Manu Aggarwal , Vipul Periwal

Building upon [2308.02636], we investigate the constraining power of persistent homology on cosmological parameters and primordial non-Gaussianity in a likelihood-free inference pipeline utilizing machine learning. We evaluate the ability…

Cosmology and Nongalactic Astrophysics · Physics 2025-09-22 Juan Calles , Jacky H. T. Yip , Gabriella Contardo , Jorge Noreña , Adam Rouhiainen , Gary Shiu

Persistent homology has been widely used to discover hidden topological structures in data across various applications, including music data. To apply persistent homology, a distance or metric must be defined between points in a point cloud…

Sound · Computer Science 2025-12-15 Eunwoo Heo , Byeongchan Choi , Myung ock Kim , Mai Lan Tran , Jae-Hun Jung

Deep learning models have achieved remarkable success across various domains, yet their learned representations and decision-making processes remain largely opaque and hard to interpret. This work introduces HOLE (Homological Observation of…

Machine Learning · Computer Science 2026-04-08 Sudhanva Manjunath Athreya , Paul Rosen

Persistence diagrams (PDs) provide a powerful tool for understanding the topology of the underlying shape of a point cloud. However, identifying which points in PDs encode genuine signals remains challenging. This challenge directly hinders…

Computer Vision and Pattern Recognition · Computer Science 2026-01-23 Yu Chen , Hongwei Lin

This research uses deep learning to estimate the topology of manifolds represented by sparse, unordered point cloud scenes in 3D. A new labelled dataset was synthesised to train neural networks and evaluate their ability to estimate the…

Computer Vision and Pattern Recognition · Computer Science 2023-10-02 Dylan Peek , Matt P. Skerritt , Stephan Chalup

Persistent homology is a method for probing topological properties of point clouds and functions. The method involves tracking the birth and death of topological features (2000) as one varies a tuning parameter. Features with short…

Exploring contextual information in the local region is important for shape understanding and analysis. Existing studies often employ hand-crafted or explicit ways to encode contextual information of local regions. However, it is hard to…

Computer Vision and Pattern Recognition · Computer Science 2018-11-16 Xinhai Liu , Zhizhong Han , Yu-Shen Liu , Matthias Zwicker

Controlling structural complexity, particularly the number of holes, remains a fundamental challenge in topology optimization, with significant implications for both theoretical analysis and manufacturability. Most existing approaches rely…

Optimization and Control · Mathematics 2026-02-17 Gengchen Li , Depeng Gao , Wenliang Yin , Hongwei Lin

Persistent homology is a cornerstone of topological data analysis, offering a multiscale summary of topology with robustness to nuisance transformations, such as rotations and small deformations. Persistent homology has seen broad use…

Methodology · Statistics 2025-11-19 Zitian Wu , Arkaprava Roy , Leo L. Duan

Persistent homology is a tool that can be employed to summarize the shape of data by quantifying homological features. When the data is an object in $\mathbb{R}^d$, the (augmented) persistent homology transform ((A)PHT) is a family of…

Computational Geometry · Computer Science 2022-12-27 Brittany Terese Fasy , Samuel Micka , David L. Millman , Anna Schenfisch , Lucia Williams

We present a novel deep learning framework for flow field predictions in irregular domains when the solution is a function of the geometry of either the domain or objects inside the domain. Grid vertices in a computational fluid dynamics…

Machine Learning · Computer Science 2021-09-20 Ali Kashefi , Davis Rempe , Leonidas J. Guibas

Machine learning has emerged as a powerful approach in materials discovery. Its major challenge is selecting features that create interpretable representations of materials, useful across multiple prediction tasks. We introduce an…

Contemporary deep neural networks offer state-of-the-art results when applied to visual reasoning, e.g., in the context of 3D point cloud data. Point clouds are important datatype for precise modeling of three-dimensional environments, but…

Machine Learning · Computer Science 2022-05-23 Maciej Zamorski , Michał Stypułkowski , Konrad Karanowski , Tomasz Trzciński , Maciej Zięba

Recent investigations on rotation invariance for 3D point clouds have been devoted to devising rotation-invariant feature descriptors or learning canonical spaces where objects are semantically aligned. Examinations of learning frameworks…

Computer Vision and Pattern Recognition · Computer Science 2023-01-03 Jianhui Yu , Chaoyi Zhang , Weidong Cai

Topological Data Analysis (TDA) combines computational topology and data science to extract and analyze intrinsic topological and geometric structures in data set in a metric space. While the persistent homology (PH), a widely used tool in…

Computational Geometry · Computer Science 2025-04-15 Chuanshen Hu , Yu Wang , Kelin Xia , Ke Ye , Yipeng Zhang
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