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In neuroscience, researchers seek to uncover the connectivity of neurons from large-scale neural recordings or imaging; often people employ graphical model selection and estimation techniques for this purpose. But, existing technologies can…

Machine Learning · Statistics 2021-04-14 Minjie Wang , Genevera I. Allen

Catastrophic forgetting remains a fundamental challenge for neural networks when tasks are trained sequentially. In this work, we reformulate continual learning as a control problem where learning and preservation signals compete within…

Machine Learning · Computer Science 2026-02-05 Sander de Haan , Yassine Taoudi-Benchekroun , Pau Vilimelis Aceituno , Benjamin F. Grewe

Dynamic networks have been increasingly used to characterize brain connectivity that varies during resting and task states. In such characterizations, a connectivity network is typically measured at each time point for a subject over a…

Methodology · Statistics 2023-03-23 Maoyu Zhang , Biao Cai , Wenlin Dai , Dehan Kong , Hongyu Zhao , Jingfei Zhang

Probing the developing neural circuitry in Caenorhabditis elegans has enhanced our understanding of nervous systems. The C. elegans connectome, like those of other species, is characterized by a rich club of densely connected neurons…

Neurons and Cognition · Quantitative Biology 2021-08-26 Alec Helm , Ann S. Blevins , Danielle S. Bassett

From the proliferative mechanisms generating neurons from progenitor cells to neuron migration and synaptic connection formation, several vicissitudes culminate in the mature brain. Both component loss and gain remain ubiquitous during…

Neurons and Cognition · Quantitative Biology 2024-08-06 Rodrigo Siqueira Kazu , Kleber Neves , Bruno Mota

Student dropout is a significant challenge in educational systems worldwide, leading to substantial social and economic costs. Predicting students at risk of dropout allows for timely interventions. While traditional Machine Learning (ML)…

Machine Learning · Computer Science 2026-01-16 Pablo G. Almeida , Guilherme A. L. Silva , Valéria Santos , Gladston Moreira , Pedro Silva , Eduardo Luz

This paper studies the controllability backbone problem in dynamical networks defined over graphs. The main idea of the controllability backbone is to identify a small subset of edges in a given network such that any subnetwork containing…

Systems and Control · Electrical Eng. & Systems 2023-09-07 Obaid Ullah Ahmad , Waseem Abbas , Mudassir Shabbir

Predicting how the brain can be driven to specific states by means of internal or external control requires a fundamental understanding of the relationship between neural connectivity and activity. Network control theory is a powerful tool…

Neurons and Cognition · Quantitative Biology 2019-08-12 Teresa M. Karrer , Jason Z. Kim , Jennifer Stiso , Ari E. Kahn , Fabio Pasqualetti , Ute Habel , Danielle S. Bassett

Graph deep learning has recently emerged as a powerful ML concept allowing to generalize successful deep neural architectures to non-Euclidean structured data. Such methods have shown promising results on a broad spectrum of applications…

Machine Learning · Computer Science 2022-05-16 Anees Kazi , Luca Cosmo , Seyed-Ahmad Ahmadi , Nassir Navab , Michael Bronstein

In traditional Graph Neural Networks (GNN), graph convolutional learning is carried out through topology-driven recursive node content aggregation for network representation learning. In reality, network topology and node content are not…

Social and Information Networks · Computer Science 2020-03-31 Min Shi , Yufei Tang , Xingquan Zhu

Grand efforts in neuroscience are working toward mapping the connectomes of many new species, including the near completion of the Drosophila melanogaster. It is important to ask whether these models could benefit artificial intelligence.…

Neural and Evolutionary Computing · Computer Science 2022-12-26 Samuel Schmidgall , Catherine Schuman , Maryam Parsa

The increasing quantity and quality of the publicly available human cerebral diffusion MRI data make possible the study of the brain as it was unimaginable before. The Consensus Connectome Dynamics (CCD) is a remarkable phenomenon that was…

Neurons and Cognition · Quantitative Biology 2016-10-17 Balázs Szalkai , Vince Grolmusz

We explore the interplay between the topological relevance of a neuron and its dynamical traces in experimental cultured neuronal networks. We monitor the growth and development of these networks to characterise the evolution of their…

Adaptation and Self-Organizing Systems · Physics 2023-07-14 A. Tlaie , L. M. Ballesteros-Esteban , I. Leyva , I. Sendina-Nadal

When a large feedforward neural network is trained on a small training set, it typically performs poorly on held-out test data. This "overfitting" is greatly reduced by randomly omitting half of the feature detectors on each training case.…

Neural and Evolutionary Computing · Computer Science 2012-07-04 Geoffrey E. Hinton , Nitish Srivastava , Alex Krizhevsky , Ilya Sutskever , Ruslan R. Salakhutdinov

The interaction of distinct units in physical, social, biological and technological systems naturally gives rise to complex network structures. Networks have constantly been in the focus of research for the last decade, with considerable…

Physics and Society · Physics 2012-08-20 Tamás Nepusz , Tamás Vicsek

Controlling real-world networked systems, including ecological, biomedical, and engineered networks that exhibit higher-order interactions, remains challenging due to inherent nonlinearities and large system scales. Despite extensive…

Optimization and Control · Mathematics 2026-03-23 Joshua Pickard , Xin Mao , Can Chen

Homophily, the tendency of nodes from the same class to connect, is a fundamental property of real-world graphs, underpinning structural and semantic patterns in domains such as citation networks and social networks. Existing methods…

Machine Learning · Computer Science 2025-10-28 Yan Jiang , Ruihong Qiu , Zi Huang

We apply an information theoretic treatment of action potential time series measured with microelectrode arrays to estimate the connectivity of mammalian neuronal cell assemblies grown {\it in vitro}. We infer connectivity between two…

Neurons and Cognition · Quantitative Biology 2007-05-23 Luis M. A. Bettencourt , Greg J. Stephens , Michael I. Ham , Guenter W. Gross

Graph Transformers have recently been successful in various graph representation learning tasks, providing a number of advantages over message-passing Graph Neural Networks. Utilizing Graph Transformers for learning the representation of…

Neurons and Cognition · Quantitative Biology 2023-12-27 Byung-Hoon Kim , Jungwon Choi , EungGu Yun , Kyungsang Kim , Xiang Li , Juho Lee

In node classification tasks, graph convolutional neural networks (GCNs) have demonstrated competitive performance over traditional methods on diverse graph data. However, it is known that the performance of GCNs degrades with increasing…

Machine Learning · Computer Science 2022-11-29 Yujun Yan , Milad Hashemi , Kevin Swersky , Yaoqing Yang , Danai Koutra