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The accelerating growth of global data generation demands data storage platforms that offer high capacity, long lifespan, and low energy consumption beyond the limits of electronic memory technologies. Optical storage provides an attractive…

Nanopore sequencing can read substantially longer sequences of nucleic acid molecules, called reads, than other sequencing methods, which has led to advances in genomic analysis such as the gapless human genome assembly. By analyzing the…

Genomics · Quantitative Biology 2026-05-21 Simon Ambrozak , Ulysse McConnell , Bhargav Srinivasan , Burak Ozkan , Ernest Zhang , Can Firtina

The short lifespan of traditional data storage media, coupled with an exponential increase in storage demand, has made long-term archival a fundamental problem in the data storage industry and beyond. Consequently, researchers are looking…

Image and Video Processing · Electrical Eng. & Systems 2026-03-06 Xavier Pic , Nimesh Pinnamaneni , Raja Appuswamy

Edge inference is becoming ever prevalent through its applications from retail to wearable technology. Clusters of networked resource-constrained edge devices are becoming common, yet there is no production-ready orchestration system for…

Networking and Internet Architecture · Computer Science 2022-11-21 Arjun Parthasarathy , Bhaskar Krishnamachari

Single-cell RNA sequencing (scRNA-seq), especially temporally resolved datasets, enables genome-wide profiling of gene expression dynamics at single-cell resolution across discrete time points. However, current technologies provide only…

Genomics · Quantitative Biology 2025-11-19 Yue Ling , Peiqi Zhang , Zhenyi Zhang , Peijie Zhou

Spiking Neural Networks (SNN) and the field of Neuromorphic Engineering has brought about a paradigm shift in how to approach Machine Learning (ML) and Computer Vision (CV) problem. This paradigm shift comes from the adaption of event-based…

Computer Vision and Pattern Recognition · Computer Science 2021-11-15 Paul Kirkland , Davide L. Manna , Alex Vicente-Sola , Gaetano Di Caterina

The latest generation of Timepix series hybrid pixel detectors enhance particle tracking with high spatial and temporal resolution. However, their high hit-rate capability poses challenges for data processing, particularly in multidetector…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-12-17 Tomáš Čelko , František Mráz , Benedikt Bergmann , Petr Mánek

Lossy compression and rate-adaptive streaming are a mainstay in traditional video steams. However, a new class of neuromorphic ``event'' sensors records video with asynchronous pixel samples rather than image frames. These sensors are…

Image and Video Processing · Electrical Eng. & Systems 2025-08-22 Andrew C. Freeman

We present a methodology for automated real-time analysis of a radio image data stream with the goal to find transient sources. Contrary to previous works, the transients we are interested in occur on a time-scale where dispersion starts to…

Instrumentation and Methods for Astrophysics · Physics 2021-08-09 David Ruhe , Mark Kuiack , Antonia Rowlinson , Ralph Wijers , Patrick Forré

Data scarcity remains a significant challenge in the field of emotion recognition using physiological signals, as acquiring comprehensive and diverse datasets is often prevented by privacy concerns and logistical constraints. This…

Neural and Evolutionary Computing · Computer Science 2025-01-29 S. Muhammad Hossein Mousavi

Diffusion models are a strong backbone for visual generation, but their inherently sequential denoising process leads to slow inference. Previous methods accelerate sampling by caching and reusing intermediate outputs based on feature…

Computer Vision and Pattern Recognition · Computer Science 2026-03-25 Jiwoo Chung , Sangeek Hyun , MinKyu Lee , Byeongju Han , Geonho Cha , Dongyoon Wee , Youngjun Hong , Jae-Pil Heo

Digital technologies have made it possible to deploy visual sensor nodes capable of detecting motion events in the coverage area cost-effectively. However, background subtraction, as a widely used approach, remains an intractable task due…

Signal Processing · Electrical Eng. & Systems 2023-02-13 Sepehr Tabrizchi , Mehrdad Morsali , Shaahin Angizi , Arman Roohi

We propose a new abstraction set (SynopSet) that has a continuum of visual representations for the explanatory analysis of molecular dynamics simulations (MDS) in the DNA nanotechnology domain. By re-purposing the commonly used progress bar…

Quantitative Methods · Quantitative Biology 2022-05-04 Deng Luo , Alexandre Kouyoumdjian , Ondřej Strnad , Haichao Miao , Ivan Barišić , Ivan Viola

Longitudinal resolution and lateral sensitivity are decisive characteristics that determine the suitability of a nanopore sensor for sequencing a strand of DNA as well as other important polymers. Previous modeling of DNA induced ionic…

Biological Physics · Physics 2012-05-18 Slaven Garaj , Song Liu , Daniel Branton , Jene A. Golovchenko

Molecular dynamics simulations can generate atomically detailed trajectories of complex systems, but analyzing these dynamics can be challenging when systems lack well-established quantitative descriptors (features). Graph neural networks…

Machine Learning · Computer Science 2025-12-09 Zihan Pengmei , Spencer C. Guo , Chatipat Lorpaiboon , Aaron R. Dinner

Many new material systems are being explored to enable smaller, more capable and energy efficient devices. These bottom up approaches for atomic and molecular electronics, quantum computation, and data storage all rely on a well-developed…

Materials Science · Physics 2020-02-11 Roshan Achal , Mohammad Rashidi , Jeremiah Croshaw , Taleana Huff , Robert A. Wolkow

High-quality and challenging event stream datasets play an important role in the design of an efficient event-driven mechanism that mimics the brain. Although event cameras can provide high dynamic range and low-energy event stream data,…

Neural and Evolutionary Computing · Computer Science 2022-05-25 Guobin Shen , Dongcheng Zhao , Yi Zeng

We propose a novel theoretical biomolecular design to implement any Boolean circuit using the mechanism of DNA strand displacement. The design is scalable: all species of DNA strands can in principle be mixed and prepared in a single test…

Other Computer Science · Computer Science 2015-05-18 Ehsan Chiniforooshan , David Doty , Lila Kari , Shinnosuke Seki

As neural interfaces become more advanced, there has been an increase in the volume and complexity of neural data recordings. These interfaces capture rich information about neural dynamics that call for efficient, real-time processing…

Neural and Evolutionary Computing · Computer Science 2024-08-26 Sai Deepesh Pokala , Marie Bernert , Takuya Nanami , Takashi Kohno , Timothée Lévi , Blaise Yvert

Standard frame-based cameras that sample light intensity frames are heavily impacted by motion blur for high-speed motion and fail to perceive scene accurately when the dynamic range is high. Event-based cameras, on the other hand, overcome…

Computer Vision and Pattern Recognition · Computer Science 2021-03-22 Chankyu Lee , Adarsh Kumar Kosta , Kaushik Roy