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Using a steady state process of node duplication and deletion we produce networks with 1/k scale-free degree distributions in the limit of vanishing connectance. This occurs even though there is no growth involved and inherent preferential…

Statistical Mechanics · Physics 2007-05-23 Simon Laird , Henrik Jeldtoft Jensen

Phylogenetic networks are mathematical structures for modeling and visualization of reticulation processes in the study of evolution. Galled networks, reticulation visible networks, nearly-stable networks and stable-child networks are the…

Populations and Evolution · Quantitative Biology 2015-10-02 Andreas D. M. Gunawan , Louxin Zhang

Growing synthetic networks that follow power law distributions of a node's degree often involves adding one node at a time. Each node is added to the network with a fixed amount of edges and those edges are frozen for all future time steps.…

Physics and Society · Physics 2026-01-27 Justin Downes

Many important real-world networks manifest "small-world" properties such as scale-free degree distributions, small diameters, and clustering. The most common model of growth for these networks is "preferential attachment", where nodes…

Quantitative Methods · Quantitative Biology 2009-11-13 Samarth Swarup , Les Gasser

Recent results from statistical physics show that large classes of complex networks, both man-made and of natural origin, are characterized by high clustering properties yet strikingly short path lengths between pairs of nodes. This class…

Information Theory · Computer Science 2016-11-17 Rui A. Costa , Joao Barros

Many natural, physical and social networks commonly exhibit power-law degree distributions. In this paper, we discover previously unreported asymmetrical patterns in the degree distributions of incoming and outgoing links in the…

Social and Information Networks · Computer Science 2015-07-17 Jianxi Luo , Daniel E. Whitney

Many classes of phylogenetic networks have been proposed in the literature. A feature of several of these classes is that if one restricts a network in the class to a subset of its leaves, then the resulting network may no longer lie within…

Populations and Evolution · Quantitative Biology 2025-09-24 Michael Fuchs , Mike Steel

Connectivity correlations play an important role in the structure of scale-free networks. While several empirical studies exist, there is no general theoretical analysis that can explain the largely varying behavior of real networks. Here,…

Physics and Society · Physics 2009-11-13 Lazaros K. Gallos , Chaoming Song , Hernan A. Makse

In Francis and Steel (2015), it was shown that there exists non-trivial networks on $4$ leaves upon which the distance metric affords a metric on a tree which is not the base tree of the network. In this paper we extend this result in two…

Populations and Evolution · Quantitative Biology 2019-06-06 Michael Hendriksen

The local minima (inherent structures) of a system and their associated transition links give rise to a network. Here we consider the topological and distance properties of such a network in the context of spin glasses. We use steepest…

Disordered Systems and Neural Networks · Physics 2009-11-13 Z. Burda , A. Krzywicki , O. C. Martin

Many real-world networks have properties of small-world networks, with clustered local neighborhoods and low average-shortest path (ASP). They may also show a scale-free degree distribution, which can be generated by growth and preferential…

Statistical Mechanics · Physics 2007-05-23 Marcus Kaiser , Claus C. Hilgetag

The displayed tree phylogenetic network model is shown to sit as a natural submodel of the graphical model associated to a directed acyclic graph (DAG). This representation allows to derive a number of results about the displayed tree…

Populations and Evolution · Quantitative Biology 2025-08-01 Seth Sullivant

We evaluate analytically and numerically the size of the frozen core and various scaling laws for critical Boolean networks that have a power-law in- and/or out-degree distribution. To this purpose, we generalize an efficient method that…

Molecular Networks · Quantitative Biology 2015-06-12 Marco Möller , Barbara Drossel

We study the role of finiteness and fluctuations about average quantities for basic structural properties of growing networks. We first determine the exact degree distribution of finite networks by generating function approaches. The…

Statistical Mechanics · Physics 2009-11-07 P. L. Krapivsky , S. Redner

Unrooted phylogenetic networks are graphs used to represent evolutionary relationships. Accurately reconstructing such networks is of great relevance for evolutionary biology. It has recently been conjectured that all phylogenetic networks…

Combinatorics · Mathematics 2021-01-01 Péter L. Erdős , Leo van Iersel , Mark Jones

We propose a general geometric growth model for pseudofractal scale-free web, which is controlled by two tunable parameters. We derive exactly the main characteristics of the networks: degree distribution, second moment of degree…

Statistical Mechanics · Physics 2007-05-23 Zhongzhi Zhang , Lili Rong , Shuigeng Zhou

The probability distribution of number of ties of an individual in a social network follows a scale-free power-law. However, how this distribution arises has not been conclusively demonstrated in direct analyses of people's actions in…

Physics and Society · Physics 2014-08-25 Lev Muchnik , Sen Pei , Lucas C. Parra , Saulo D. S. Reis , Jose S. Andrade, , Shlomo Havlin , Hernan A. Makse

Recently a distributed algorithm has been proposed for multi-agent networks to solve a system of linear algebraic equations, by assuming each agent only knows part of the system and is able to communicate with nearest neighbors to update…

Optimization and Control · Mathematics 2016-03-15 Hong-Tai Cao , Travis E. Gibson , Shaoshuai Mou , Yang-Yu Liu

The common real-world feature of individuals migrating through a network -- either in real space or online -- significantly complicates understanding of network processes. Here we show that even though a network may appear static on…

Physics and Society · Physics 2016-08-24 Pedro D. Manrique , Hong Qi , Minzhang Zheng , Chen Xu , Pak Ming Hui , Neil F. Johnson

In studying network growth, the conventional approach is to devise a growth mechanism, quantify the evolution of a statistic or distribution (such as the degree distribution), and then solve the equations in the steady state (the…

Physics and Society · Physics 2014-11-05 Babak Fotouhi
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