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Classical numerical methods solve partial differential equations (PDEs) efficiently on regular meshes, but many of them become unstable on irregular domains. In practice, multiphysics interactions such as diffusion, damage, and healing…
The aim of this study is to compare numerical methods for the simulation of single-phase flow and transport in fractured media, described here by means of the Discrete Fracture Network (DFN) model. A Darcy problem is solved to compute the…
Mathematical models of protein-protein dynamics, such as the heterodimer model, play a crucial role in understanding many physical phenomena. This model is a system of two semilinear parabolic partial differential equations describing the…
Offline computation is an essential component in most multiscale model reduction techniques. However, there are multiscale problems in which offline procedure is insufficient to give accurate representations of solutions, due to the fact…
We considered diffusion-driven processes on small-world networks with distance-dependent random links. The study of diffusion on such networks is motivated by transport on randomly folded polymer chains, synchronization problems in…
The modeling and control of single-phase flow systems governed by Partial Differential Equations (PDEs) present challenges, especially under transient conditions. In this work, we extend the Physics-Informed Neural Nets for Control (PINC)…
We introduce and analyze a discontinuous Galerkin method for the numerical modelling of the equations of Multiple-Network Poroelastic Theory (MPET) in the dynamic formulation. The MPET model can comprehensively describe functional changes…
We present a high-order hybridizable discontinuous Galerkin method for the numerical solution of time-dependent three-phase flow in heterogeneous porous media. The underlying algorithm is a semi-implicit operator splitting approach that…
We focus on the numerical analysis of a polygonal discontinuous Galerkin scheme for the simulation of the exchange of fluid between a deformable saturated poroelastic structure and an adjacent free-flow channel. We specifically address wave…
Large-scale PDE simulations using high-order finite-element methods on unstructured meshes are an indispensable tool in science and engineering. The widely used open-source PETSc library offers an efficient representation of generic…
We present a hybrid mimetic finite-difference and virtual element formulation for coupled single-phase poromechanics on unstructured meshes. The key advantage of the scheme is that it is convergent on complex meshes containing highly…
In this article we address the three-dimensional modeling and simulation of biological ion channels using a continuum-based approach. Our multi-physics formulation self-consistently combines, to the best of our knowledge for the first time,…
We propose a novel class of graph neural networks based on the discretised Beltrami flow, a non-Euclidean diffusion PDE. In our model, node features are supplemented with positional encodings derived from the graph topology and jointly…
We study a method based on Balancing Domain Decomposition by Constraints (BDDC) for a numerical solution of a single-phase flow in heterogenous porous media. The method solves for both flux and pressure variables. The fluxes are resolved in…
High-order numerical methods for unstructured grids combine the superior accuracy of high-order spectral or finite difference methods with the geometric flexibility of low-order finite volume or finite element schemes. The Flux…
Machine learning methods have been lately used to solve partial differential equations (PDEs) and dynamical systems. These approaches have been developed into a novel research field known as scientific machine learning in which techniques…
Coupled multiphysics simulations for high-dimensional, large-scale problems can be prohibitively expensive due to their computational demands. This article presents a novel framework integrating a deep operator network (DeepONet) with the…
For linear transport and radiative heat transfer equations with random inputs, we develop new generalized polynomial chaos based Asymptotic-Preserving stochastic Galerkin schemes that allow efficient computation for the problems that…
The implementation of discontinuous Galerkin finite element methods (DGFEMs) represents a very challenging computational task, particularly for systems of coupled nonlinear PDEs, including multiphysics problems, whose parameters may consist…
We present a numerical approximation of Darcy's flow through a porous medium that incorporates networks of fractures with non empty intersection. Our scheme employs PolyDG methods, i.e. discontinuous Galerkin methods on general polygonal…