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Minimizing non-convex and high-dimensional objective functions is challenging, especially when training modern deep neural networks. In this paper, a novel approach is proposed which divides the training process into two consecutive phases…

Machine Learning · Computer Science 2017-10-11 Nanyang Ye , Zhanxing Zhu , Rafal K. Mantiuk

Large transformers are powerful architectures used for self-supervised data analysis across various data types, including protein sequences, images, and text. In these models, the semantic structure of the dataset emerges from a sequence of…

Machine Learning · Computer Science 2023-10-31 Lucrezia Valeriani , Diego Doimo , Francesca Cuturello , Alessandro Laio , Alessio Ansuini , Alberto Cazzaniga

Generative models of complex systems often require post-hoc parameter adjustments to produce useful outputs. For example, energy-based models for protein design are sampled at an artificially low ''temperature'' to generate novel,…

Quantitative Methods · Quantitative Biology 2025-12-11 Peter W Fields , Vudtiwat Ngampruetikorn , David J Schwab , Stephanie E Palmer

Embedding layers in transformer-based NLP models typically account for the largest share of model parameters, scaling with vocabulary size but not yielding performance gains proportional to scale. We propose an alternative approach in which…

Computation and Language · Computer Science 2025-05-06 Henry Ndubuaku , Mouad Talhi

Large language models based on the Transformer architecture have demonstrated impressive capabilities to learn in context. However, existing theoretical studies on how this phenomenon arises are limited to the dynamics of a single layer of…

Machine Learning · Statistics 2024-06-04 Juno Kim , Taiji Suzuki

We investigate the capacity of transformers to learn algorithms involving their context while solely being trained using next token prediction. We set up Markov chains with random transition matrices and we train transformers to predict the…

Machine Learning · Computer Science 2025-08-07 Simon Lepage , Jeremie Mary , David Picard

The expansiveness of compositional phase space is too vast to fully search using current theoretical tools for many emergent problems in condensed matter physics. The reliance on a deep chemical understanding is one method to identify local…

Superconductivity · Physics 2023-01-26 Lazar Novakovic , Ashkan Salamat , Keith V. Lawler

Transformers have achieved extraordinary success in modern machine learning due to their excellent ability to handle sequential data, especially in next-token prediction (NTP) tasks. However, the theoretical understanding of their…

Machine Learning · Computer Science 2024-10-01 Ruiquan Huang , Yingbin Liang , Jing Yang

The ability of machine learning models to store input information in hidden layer vector embeddings, analogous to the concept of `memory', is widely employed but not well characterized. We find that language model embeddings typically…

Computation and Language · Computer Science 2026-05-20 Benjamin L. Badger

Transformer models have achieved state-of-the-art results across a diverse range of domains. However, concern over the cost of training the attention mechanism to learn complex dependencies between distant inputs continues to grow. In…

Pretrained Transformers can perform in-context learning (ICL) from a few demonstrations, but this ability can fail sharply when the test distribution differs from pretraining, a common deployment setting. We study attention temperature as a…

Machine Learning · Statistics 2026-05-12 Samet Demir , Zafer Dogan

Transformers have recently revolutionized many domains in modern machine learning and one salient discovery is their remarkable in-context learning capability, where models can solve an unseen task by utilizing task-specific prompts without…

Machine Learning · Computer Science 2023-10-10 Yu Huang , Yuan Cheng , Yingbin Liang

Modern large language models (LLMs) excel at tasks that require storing and retrieving knowledge, such as factual recall and question answering. Transformers are central to this capability because they can encode information during training…

Machine Learning · Statistics 2026-03-18 Nuri Mert Vural , Alberto Bietti , Mahdi Soltanolkotabi , Denny Wu

The InfoNCE loss in contrastive learning depends critically on a temperature parameter, yet its dynamics under fixed versus annealed schedules remain poorly understood. We provide a theoretical analysis by modeling embedding evolution under…

Machine Learning · Computer Science 2026-03-16 Faris Chaudhry

Over the past six years, molecular transformer models have become key tools in drug discovery. Most existing models are pre-trained on large, unlabeled datasets such as ZINC or ChEMBL. However, the extent to which large-scale pre-training…

Machine Learning · Computer Science 2025-05-23 Afnan Sultan , Max Rausch-Dupont , Shahrukh Khan , Olga Kalinina , Dietrich Klakow , Andrea Volkamer

Metric learning aims at learning a distance which is consistent with the semantic meaning of the samples. The problem is generally solved by learning an embedding for each sample such that the embeddings of samples of the same category are…

Machine Learning · Computer Science 2018-09-13 Xu Zhang , Felix Xinnan Yu , Svebor Karaman , Wei Zhang , Shih-Fu Chang

The training of neural networks is a complex, high-dimensional, non-convex and noisy optimization problem whose theoretical understanding is interesting both from an applicative perspective and for fundamental reasons. A core challenge is…

Statistical Mechanics · Physics 2023-04-19 Theo Jules , Gal Brener , Tal Kachman , Noam Levi , Yohai Bar-Sinai

We investigate the application of deep learning techniques employing the conditional variational autoencoders for semi-supervised learning of latent parameters to describe phase transition in the two-dimensional (2D) ferromagnetic Ising…

Statistical Mechanics · Physics 2023-06-30 Adwait Naravane , Nilmani Mathur

Large language models based on transformers have achieved great empirical successes. However, as they are deployed more widely, there is a growing need to better understand their internal mechanisms in order to make them more reliable.…

Machine Learning · Statistics 2023-11-08 Alberto Bietti , Vivien Cabannes , Diane Bouchacourt , Herve Jegou , Leon Bottou

Recently, there have been many works on the deep learning of statistical ensembles to determine the critical temperature of a possible phase transition. We analyze the detailed structure of an optimized deep learning machine and prove the…

Statistical Mechanics · Physics 2019-04-23 Ken-Ichi Aoki , Tatsuhiro Fujita , Tamao Kobayashi
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